Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.53■□□□□ 0.88
PDX1P52945 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.53■□□□□ 0.88
PDX1P52945 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDX1P52945 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDX1P52945 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDX1P52945 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.53■□□□□ 0.88
PDX1P52945 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDX1P52945 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDX1P52945 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDX1P52945 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDX1P52945 LINC00526-201ENST00000581067 1875 ntBASIC20.52■□□□□ 0.88
PDX1P52945 EP400NL-214ENST00000641289 2402 ntBASIC20.52■□□□□ 0.88
PDX1P52945 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.52■□□□□ 0.88
PDX1P52945 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.52■□□□□ 0.88
PDX1P52945 AC105036.2-201ENST00000569468 176 ntBASIC20.52■□□□□ 0.88
PDX1P52945 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDX1P52945 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDX1P52945 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PDX1P52945 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.51■□□□□ 0.87
PDX1P52945 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDX1P52945 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.51■□□□□ 0.87
PDX1P52945 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.51■□□□□ 0.87
PDX1P52945 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PDX1P52945 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.51■□□□□ 0.87
PDX1P52945 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDX1P52945 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDX1P52945 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDX1P52945 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDX1P52945 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PDX1P52945 AC073210.2-201ENST00000430369 194 ntBASIC20.5■□□□□ 0.87
PDX1P52945 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.5■□□□□ 0.87
PDX1P52945 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.5■□□□□ 0.87
PDX1P52945 EEF1DP3-203ENST00000566025 782 ntBASIC20.5■□□□□ 0.87
PDX1P52945 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 AC066615.1-201ENST00000640911 628 ntBASIC20.5■□□□□ 0.87
PDX1P52945 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.5■□□□□ 0.87
PDX1P52945 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDX1P52945 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDX1P52945 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDX1P52945 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDX1P52945 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDX1P52945 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.49■□□□□ 0.87
PDX1P52945 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.49■□□□□ 0.87
PDX1P52945 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDX1P52945 OR7E47P-201ENST00000546390 1422 ntBASIC20.49■□□□□ 0.87
PDX1P52945 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.49■□□□□ 0.87
PDX1P52945 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.49■□□□□ 0.87
PDX1P52945 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDX1P52945 AP006587.3-201ENST00000525742 1516 ntBASIC20.48■□□□□ 0.87
PDX1P52945 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PDX1P52945 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
PDX1P52945 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.48■□□□□ 0.87
PDX1P52945 CYP2T1P-201ENST00000432607 1285 ntBASIC20.48■□□□□ 0.87
PDX1P52945 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.48■□□□□ 0.87
PDX1P52945 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.48■□□□□ 0.87
PDX1P52945 AC013268.1-206ENST00000638368 961 ntBASIC20.48■□□□□ 0.87
PDX1P52945 AC112229.1-201ENST00000639295 961 ntBASIC20.48■□□□□ 0.87
PDX1P52945 AC133041.1-202ENST00000642053 222 ntBASIC20.48■□□□□ 0.87
PDX1P52945 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDX1P52945 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDX1P52945 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDX1P52945 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms