Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
EFNA4P52798 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNA4P52798 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFNA4P52798 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNA4P52798 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.78■□□□□ 0.44
EFNA4P52798 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNA4P52798 AC092053.2-201ENST00000640557 1818 ntBASIC17.77■□□□□ 0.44
EFNA4P52798 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNA4P52798 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNA4P52798 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.77■□□□□ 0.44
EFNA4P52798 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNA4P52798 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNA4P52798 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNA4P52798 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNA4P52798 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNA4P52798 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNA4P52798 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
EFNA4P52798 AC016405.3-201ENST00000607710 860 ntBASIC17.77■□□□□ 0.44
EFNA4P52798 AC243732.1-201ENST00000612648 864 ntBASIC17.77■□□□□ 0.44
EFNA4P52798 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.77■□□□□ 0.44
EFNA4P52798 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EFNA4P52798 RBM17P2-201ENST00000616397 1405 ntBASIC17.77■□□□□ 0.44
EFNA4P52798 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.77■□□□□ 0.43
EFNA4P52798 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
EFNA4P52798 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.77■□□□□ 0.43
EFNA4P52798 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.77■□□□□ 0.43
EFNA4P52798 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
EFNA4P52798 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
EFNA4P52798 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNA4P52798 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
EFNA4P52798 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
EFNA4P52798 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
EFNA4P52798 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNA4P52798 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.76■□□□□ 0.43
EFNA4P52798 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.76■□□□□ 0.43
EFNA4P52798 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.76■□□□□ 0.43
EFNA4P52798 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNA4P52798 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.76■□□□□ 0.43
EFNA4P52798 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 AC003102.1-202ENST00000563394 1796 ntBASIC17.76■□□□□ 0.43
EFNA4P52798 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNA4P52798 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.75■□□□□ 0.43
EFNA4P52798 AC098934.4-201ENST00000564127 592 ntBASIC17.75■□□□□ 0.43
EFNA4P52798 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.75■□□□□ 0.43
EFNA4P52798 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
EFNA4P52798 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
EFNA4P52798 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNA4P52798 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.74■□□□□ 0.43
EFNA4P52798 AC061975.6-201ENST00000579045 1553 ntBASIC17.74■□□□□ 0.43
EFNA4P52798 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EFNA4P52798 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNA4P52798 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.74■□□□□ 0.43
EFNA4P52798 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNA4P52798 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
EFNA4P52798 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.74■□□□□ 0.43
EFNA4P52798 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EFNA4P52798 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.74■□□□□ 0.43
EFNA4P52798 AC093787.1-201ENST00000450396 207 ntBASIC17.74■□□□□ 0.43
EFNA4P52798 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.74■□□□□ 0.43
EFNA4P52798 FAM201B-201ENST00000458407 597 ntBASIC17.74■□□□□ 0.43
EFNA4P52798 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.74■□□□□ 0.43
EFNA4P52798 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.74■□□□□ 0.43
EFNA4P52798 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.74■□□□□ 0.43
EFNA4P52798 AC092118.2-201ENST00000613495 667 ntBASIC17.74■□□□□ 0.43
EFNA4P52798 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.74■□□□□ 0.43
EFNA4P52798 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.74■□□□□ 0.43
EFNA4P52798 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
EFNA4P52798 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
EFNA4P52798 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNA4P52798 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.73■□□□□ 0.43
EFNA4P52798 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms