Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.84■□□□□ 0.77
EFNA3P52797 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.84■□□□□ 0.77
EFNA3P52797 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
EFNA3P52797 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 EP400NL-214ENST00000641289 2402 ntBASIC19.84■□□□□ 0.77
EFNA3P52797 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNA3P52797 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EFNA3P52797 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EFNA3P52797 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EFNA3P52797 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.83■□□□□ 0.77
EFNA3P52797 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
EFNA3P52797 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EFNA3P52797 CROCCP5-201ENST00000436658 830 ntBASIC19.83■□□□□ 0.77
EFNA3P52797 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EFNA3P52797 DUX4L16-201ENST00000555130 1264 ntBASIC19.83■□□□□ 0.77
EFNA3P52797 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.83■□□□□ 0.77
EFNA3P52797 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EFNA3P52797 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFNA3P52797 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
EFNA3P52797 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFNA3P52797 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 AC012676.1-201ENST00000574705 1949 ntBASIC19.82■□□□□ 0.76
EFNA3P52797 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.82■□□□□ 0.76
EFNA3P52797 KRT18P11-201ENST00000435214 1283 ntBASIC19.82■□□□□ 0.76
EFNA3P52797 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.82■□□□□ 0.76
EFNA3P52797 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
EFNA3P52797 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.82■□□□□ 0.76
EFNA3P52797 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.82■□□□□ 0.76
EFNA3P52797 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFNA3P52797 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
EFNA3P52797 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.81■□□□□ 0.76
EFNA3P52797 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.81■□□□□ 0.76
EFNA3P52797 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.81■□□□□ 0.76
EFNA3P52797 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
EFNA3P52797 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.81■□□□□ 0.76
EFNA3P52797 AC061975.6-201ENST00000579045 1553 ntBASIC19.81■□□□□ 0.76
EFNA3P52797 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.81■□□□□ 0.76
EFNA3P52797 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNA3P52797 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.81■□□□□ 0.76
EFNA3P52797 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
EFNA3P52797 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFNA3P52797 AL117328.2-201ENST00000624617 1940 ntBASIC19.8■□□□□ 0.76
EFNA3P52797 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFNA3P52797 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EFNA3P52797 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.8■□□□□ 0.76
EFNA3P52797 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFNA3P52797 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
EFNA3P52797 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.8■□□□□ 0.76
EFNA3P52797 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EFNA3P52797 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
EFNA3P52797 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
EFNA3P52797 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 CNN2P6-201ENST00000439038 900 ntBASIC19.79■□□□□ 0.76
EFNA3P52797 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.79■□□□□ 0.76
EFNA3P52797 AC026185.1-201ENST00000445748 174 ntBASIC19.79■□□□□ 0.76
EFNA3P52797 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
EFNA3P52797 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
EFNA3P52797 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms