Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCR9P51686 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCR9P51686 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCR9P51686 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCR9P51686 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCR9P51686 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCR9P51686 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCR9P51686 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.57■□□□□ 0.56
CCR9P51686 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
CCR9P51686 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CCR9P51686 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.57■□□□□ 0.56
CCR9P51686 AL512631.2-201ENST00000604634 923 ntBASIC18.57■□□□□ 0.56
CCR9P51686 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
CCR9P51686 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCR9P51686 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCR9P51686 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCR9P51686 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCR9P51686 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CCR9P51686 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
CCR9P51686 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.56■□□□□ 0.56
CCR9P51686 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.56■□□□□ 0.56
CCR9P51686 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCR9P51686 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCR9P51686 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCR9P51686 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
CCR9P51686 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCR9P51686 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.55■□□□□ 0.56
CCR9P51686 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.55■□□□□ 0.56
CCR9P51686 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.55■□□□□ 0.56
CCR9P51686 GUSBP5-201ENST00000418136 578 ntBASIC18.55■□□□□ 0.56
CCR9P51686 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.55■□□□□ 0.56
CCR9P51686 DUX4L19-201ENST00000557448 1267 ntBASIC18.55■□□□□ 0.56
CCR9P51686 AL035685.1-201ENST00000636663 812 ntBASIC18.55■□□□□ 0.56
CCR9P51686 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCR9P51686 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCR9P51686 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCR9P51686 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCR9P51686 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCR9P51686 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCR9P51686 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCR9P51686 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCR9P51686 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.54■□□□□ 0.56
CCR9P51686 RNF165-205ENST00000588679 2904 ntBASIC18.54■□□□□ 0.56
CCR9P51686 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCR9P51686 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCR9P51686 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCR9P51686 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.54■□□□□ 0.56
CCR9P51686 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.54■□□□□ 0.56
CCR9P51686 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCR9P51686 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCR9P51686 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCR9P51686 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCR9P51686 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCR9P51686 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCR9P51686 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
CCR9P51686 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCR9P51686 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.53■□□□□ 0.56
CCR9P51686 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.53■□□□□ 0.56
CCR9P51686 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.53■□□□□ 0.56
CCR9P51686 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCR9P51686 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.52■□□□□ 0.56
CCR9P51686 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.52■□□□□ 0.56
CCR9P51686 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.52■□□□□ 0.56
CCR9P51686 AC136469.2-201ENST00000623944 1028 ntBASIC18.52■□□□□ 0.56
CCR9P51686 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCR9P51686 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCR9P51686 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCR9P51686 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.52■□□□□ 0.55
CCR9P51686 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms