Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.66■□□□□ 0.58
SRP9P49458 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SRP9P49458 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.66■□□□□ 0.58
SRP9P49458 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.66■□□□□ 0.58
SRP9P49458 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.66■□□□□ 0.58
SRP9P49458 AC027682.1-201ENST00000562846 899 ntBASIC18.66■□□□□ 0.58
SRP9P49458 AC233992.3-201ENST00000607491 485 ntBASIC18.66■□□□□ 0.58
SRP9P49458 AC068587.7-201ENST00000641602 218 ntBASIC18.66■□□□□ 0.58
SRP9P49458 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.66■□□□□ 0.58
SRP9P49458 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.66■□□□□ 0.58
SRP9P49458 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRP9P49458 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRP9P49458 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SRP9P49458 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRP9P49458 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.65■□□□□ 0.58
SRP9P49458 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRP9P49458 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.65■□□□□ 0.58
SRP9P49458 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SRP9P49458 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRP9P49458 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.65■□□□□ 0.58
SRP9P49458 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.65■□□□□ 0.58
SRP9P49458 SLC47A1P1-202ENST00000449666 945 ntBASIC18.65■□□□□ 0.58
SRP9P49458 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRP9P49458 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.65■□□□□ 0.58
SRP9P49458 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRP9P49458 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRP9P49458 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRP9P49458 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRP9P49458 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.64■□□□□ 0.58
SRP9P49458 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SRP9P49458 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SRP9P49458 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SRP9P49458 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SRP9P49458 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.64■□□□□ 0.57
SRP9P49458 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 MIR638-201ENST00000385237 100 ntBASIC18.64■□□□□ 0.57
SRP9P49458 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SRP9P49458 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 AC142381.2-201ENST00000566120 298 ntBASIC18.64■□□□□ 0.57
SRP9P49458 AC008764.7-201ENST00000593779 1081 ntBASIC18.64■□□□□ 0.57
SRP9P49458 AC005837.3-201ENST00000612163 286 ntBASIC18.64■□□□□ 0.57
SRP9P49458 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SRP9P49458 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SRP9P49458 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRP9P49458 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.63■□□□□ 0.57
SRP9P49458 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRP9P49458 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRP9P49458 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.63■□□□□ 0.57
SRP9P49458 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.63■□□□□ 0.57
SRP9P49458 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.63■□□□□ 0.57
SRP9P49458 AC087239.1-201ENST00000622671 572 ntBASIC18.63■□□□□ 0.57
SRP9P49458 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.63■□□□□ 0.57
SRP9P49458 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRP9P49458 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SRP9P49458 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRP9P49458 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRP9P49458 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.62■□□□□ 0.57
SRP9P49458 AP001330.3-201ENST00000520123 633 ntBASIC18.62■□□□□ 0.57
SRP9P49458 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.62■□□□□ 0.57
SRP9P49458 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.62■□□□□ 0.57
SRP9P49458 AF213884.3-201ENST00000563833 479 ntBASIC18.62■□□□□ 0.57
SRP9P49458 AC126544.1-201ENST00000580842 1059 ntBASIC18.62■□□□□ 0.57
SRP9P49458 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.62■□□□□ 0.57
SRP9P49458 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.62■□□□□ 0.57
SRP9P49458 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRP9P49458 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRP9P49458 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.62■□□□□ 0.57
SRP9P49458 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRP9P49458 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 LINC01960-201ENST00000563759 1884 ntBASIC18.61■□□□□ 0.57
SRP9P49458 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms