Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 AF106564.1-201ENST00000607058 2553 ntBASIC19.31■□□□□ 0.68
SLC9A3P48764 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC9A3P48764 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 AL391422.3-201ENST00000603791 2761 ntBASIC19.3■□□□□ 0.68
SLC9A3P48764 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SLC9A3P48764 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC9A3P48764 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC9A3P48764 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC9A3P48764 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC9A3P48764 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC9A3P48764 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC9A3P48764 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 AP004607.7-201ENST00000527152 1677 ntBASIC19.3■□□□□ 0.68
SLC9A3P48764 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3P48764 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC9A3P48764 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC9A3P48764 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC9A3P48764 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC9A3P48764 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC9A3P48764 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC9A3P48764 LINC01521-201ENST00000504184 1943 ntBASIC19.29■□□□□ 0.68
SLC9A3P48764 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3P48764 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC9A3P48764 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC9A3P48764 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC9A3P48764 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC9A3P48764 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC9A3P48764 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC9A3P48764 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC9A3P48764 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC9A3P48764 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLC9A3P48764 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC9A3P48764 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC9A3P48764 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC9A3P48764 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC9A3P48764 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC9A3P48764 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC9A3P48764 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC9A3P48764 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC9A3P48764 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC9A3P48764 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC9A3P48764 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC9A3P48764 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC9A3P48764 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC9A3P48764 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC9A3P48764 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC9A3P48764 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC9A3P48764 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 AL136116.3-201ENST00000402907 1138 ntBASIC19.26■□□□□ 0.67
SLC9A3P48764 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC9A3P48764 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC9A3P48764 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC9A3P48764 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC9A3P48764 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
SLC9A3P48764 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC9A3P48764 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SLC9A3P48764 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 FEM1AP4-201ENST00000443167 1987 ntBASIC19.26■□□□□ 0.67
SLC9A3P48764 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC9A3P48764 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC9A3P48764 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC9A3P48764 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC9A3P48764 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC9A3P48764 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC9A3P48764 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC9A3P48764 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms