Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
BRCC3P46736 GUSBP6-202ENST00000438529 1198 ntBASIC22.6■■□□□ 1.21
BRCC3P46736 TSPY6P-201ENST00000448518 926 ntBASIC22.6■■□□□ 1.21
BRCC3P46736 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.6■■□□□ 1.21
BRCC3P46736 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BRCC3P46736 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRCC3P46736 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BRCC3P46736 FAM99A-202ENST00000538190 1989 ntBASIC22.59■■□□□ 1.21
BRCC3P46736 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.59■■□□□ 1.21
BRCC3P46736 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.59■■□□□ 1.21
BRCC3P46736 POU5F1P4-201ENST00000413175 1085 ntBASIC22.59■■□□□ 1.21
BRCC3P46736 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
BRCC3P46736 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.59■■□□□ 1.21
BRCC3P46736 AC120498.10-201ENST00000621827 505 ntBASIC22.59■■□□□ 1.21
BRCC3P46736 AC013268.1-206ENST00000638368 961 ntBASIC22.59■■□□□ 1.21
BRCC3P46736 AC112229.1-201ENST00000639295 961 ntBASIC22.59■■□□□ 1.21
BRCC3P46736 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.59■■□□□ 1.21
BRCC3P46736 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
BRCC3P46736 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.59■■□□□ 1.21
BRCC3P46736 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.59■■□□□ 1.21
BRCC3P46736 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.58■■□□□ 1.21
BRCC3P46736 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
BRCC3P46736 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
BRCC3P46736 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
BRCC3P46736 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.58■■□□□ 1.21
BRCC3P46736 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
BRCC3P46736 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.58■■□□□ 1.21
BRCC3P46736 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
BRCC3P46736 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
BRCC3P46736 AC068338.2-201ENST00000563278 1430 ntBASIC22.57■■□□□ 1.2
BRCC3P46736 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRCC3P46736 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.57■■□□□ 1.2
BRCC3P46736 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.57■■□□□ 1.2
BRCC3P46736 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRCC3P46736 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRCC3P46736 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.57■■□□□ 1.2
BRCC3P46736 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRCC3P46736 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.57■■□□□ 1.2
BRCC3P46736 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRCC3P46736 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
BRCC3P46736 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRCC3P46736 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.56■■□□□ 1.2
BRCC3P46736 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
BRCC3P46736 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRCC3P46736 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRCC3P46736 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
BRCC3P46736 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.56■■□□□ 1.2
BRCC3P46736 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BRCC3P46736 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
BRCC3P46736 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.56■■□□□ 1.2
BRCC3P46736 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRCC3P46736 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRCC3P46736 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRCC3P46736 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRCC3P46736 AF201337.1-201ENST00000520239 748 ntBASIC22.55■■□□□ 1.2
BRCC3P46736 AC105036.2-201ENST00000569468 176 ntBASIC22.55■■□□□ 1.2
BRCC3P46736 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
BRCC3P46736 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.55■■□□□ 1.2
BRCC3P46736 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.55■■□□□ 1.2
BRCC3P46736 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRCC3P46736 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRCC3P46736 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.55■■□□□ 1.2
BRCC3P46736 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRCC3P46736 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRCC3P46736 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
BRCC3P46736 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRCC3P46736 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BRCC3P46736 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.54■■□□□ 1.2
BRCC3P46736 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.54■■□□□ 1.2
BRCC3P46736 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRCC3P46736 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
BRCC3P46736 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRCC3P46736 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
BRCC3P46736 CYP2T1P-201ENST00000432607 1285 ntBASIC22.54■■□□□ 1.2
BRCC3P46736 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.54■■□□□ 1.2
BRCC3P46736 AL138781.1-201ENST00000566567 1274 ntBASIC22.54■■□□□ 1.2
BRCC3P46736 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.54■■□□□ 1.2
BRCC3P46736 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.54■■□□□ 1.2
BRCC3P46736 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.54■■□□□ 1.2
BRCC3P46736 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.54■■□□□ 1.2
BRCC3P46736 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRCC3P46736 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
BRCC3P46736 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRCC3P46736 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.53■■□□□ 1.2
BRCC3P46736 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.53■■□□□ 1.2
BRCC3P46736 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.53■■□□□ 1.2
BRCC3P46736 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BRCC3P46736 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
BRCC3P46736 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.53■■□□□ 1.2
BRCC3P46736 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.53■■□□□ 1.2
BRCC3P46736 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.53■■□□□ 1.2
BRCC3P46736 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRCC3P46736 AC142086.2-201ENST00000569753 217 ntBASIC22.53■■□□□ 1.2
BRCC3P46736 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRCC3P46736 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.53■■□□□ 1.2
BRCC3P46736 AC233723.2-201ENST00000623798 2106 ntBASIC22.53■■□□□ 1.2
BRCC3P46736 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BRCC3P46736 KRT16P2-201ENST00000414673 1423 ntBASIC22.53■■□□□ 1.2
BRCC3P46736 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BRCC3P46736 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms