Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SSR2P43308 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR2P43308 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.16■□□□□ 0.82
SSR2P43308 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 YBX1P1-201ENST00000445822 960 ntBASIC20.16■□□□□ 0.82
SSR2P43308 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SSR2P43308 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.16■□□□□ 0.82
SSR2P43308 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.16■□□□□ 0.82
SSR2P43308 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 LINC02228-203ENST00000641970 1355 ntBASIC20.16■□□□□ 0.82
SSR2P43308 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SSR2P43308 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSR2P43308 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SSR2P43308 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.15■□□□□ 0.82
SSR2P43308 Z98882.1-201ENST00000622160 2253 ntBASIC20.15■□□□□ 0.82
SSR2P43308 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 AC079140.4-201ENST00000507448 529 ntBASIC20.15■□□□□ 0.82
SSR2P43308 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSR2P43308 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SSR2P43308 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR2P43308 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.14■□□□□ 0.81
SSR2P43308 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SSR2P43308 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SSR2P43308 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR2P43308 AC123595.1-201ENST00000440769 1046 ntBASIC20.14■□□□□ 0.81
SSR2P43308 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.14■□□□□ 0.81
SSR2P43308 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR2P43308 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SSR2P43308 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSR2P43308 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.14■□□□□ 0.81
SSR2P43308 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR2P43308 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR2P43308 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SSR2P43308 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.13■□□□□ 0.81
SSR2P43308 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SSR2P43308 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSR2P43308 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SSR2P43308 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.12■□□□□ 0.81
SSR2P43308 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.12■□□□□ 0.81
SSR2P43308 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 AC007375.3-201ENST00000600936 2314 ntBASIC20.12■□□□□ 0.81
SSR2P43308 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SSR2P43308 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.12■□□□□ 0.81
SSR2P43308 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.12■□□□□ 0.81
SSR2P43308 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.12■□□□□ 0.81
SSR2P43308 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SSR2P43308 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSR2P43308 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.12■□□□□ 0.81
SSR2P43308 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.12■□□□□ 0.81
SSR2P43308 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SSR2P43308 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SSR2P43308 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SSR2P43308 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SSR2P43308 AC019069.1-201ENST00000610008 1333 ntBASIC20.11■□□□□ 0.81
SSR2P43308 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSR2P43308 CLDN5-201ENST00000403084 2357 ntBASIC20.11■□□□□ 0.81
SSR2P43308 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.11■□□□□ 0.81
SSR2P43308 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SSR2P43308 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms