Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNCAP37840 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.31■□□□□ 0.36
SNCAP37840 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.31■□□□□ 0.36
SNCAP37840 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCAP37840 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SNCAP37840 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.31■□□□□ 0.36
SNCAP37840 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SNCAP37840 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SNCAP37840 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 CA15P2-201ENST00000611168 834 ntBASIC17.3■□□□□ 0.36
SNCAP37840 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.3■□□□□ 0.36
SNCAP37840 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCAP37840 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
SNCAP37840 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.29■□□□□ 0.36
SNCAP37840 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SNCAP37840 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.29■□□□□ 0.36
SNCAP37840 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SNCAP37840 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SNCAP37840 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 RARRES2P1-201ENST00000474487 481 ntBASIC17.29■□□□□ 0.36
SNCAP37840 AL117332.1-201ENST00000622628 974 ntBASIC17.29■□□□□ 0.36
SNCAP37840 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.29■□□□□ 0.36
SNCAP37840 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.29■□□□□ 0.36
SNCAP37840 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.29■□□□□ 0.36
SNCAP37840 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SNCAP37840 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SNCAP37840 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SNCAP37840 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNCAP37840 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNCAP37840 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SNCAP37840 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.28■□□□□ 0.36
SNCAP37840 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SNCAP37840 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 AC241377.3-202ENST00000626088 1088 ntBASIC17.28■□□□□ 0.36
SNCAP37840 AC241585.3-202ENST00000628937 1088 ntBASIC17.28■□□□□ 0.36
SNCAP37840 AC245100.8-202ENST00000629247 1058 ntBASIC17.28■□□□□ 0.36
SNCAP37840 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.28■□□□□ 0.36
SNCAP37840 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.28■□□□□ 0.36
SNCAP37840 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCAP37840 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.27■□□□□ 0.36
SNCAP37840 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNCAP37840 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNCAP37840 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.27■□□□□ 0.36
SNCAP37840 AC009299.2-201ENST00000482477 511 ntBASIC17.27■□□□□ 0.36
SNCAP37840 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SNCAP37840 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SNCAP37840 AL499627.2-201ENST00000606283 725 ntBASIC17.27■□□□□ 0.36
SNCAP37840 MIR6724-1-201ENST00000616420 92 ntBASIC17.27■□□□□ 0.36
SNCAP37840 MIR6724-2-201ENST00000616483 92 ntBASIC17.27■□□□□ 0.36
SNCAP37840 MIR6724-4-201ENST00000617390 92 ntBASIC17.27■□□□□ 0.36
SNCAP37840 MIR6724-3-201ENST00000622482 92 ntBASIC17.27■□□□□ 0.36
SNCAP37840 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.27■□□□□ 0.35
SNCAP37840 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNCAP37840 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNCAP37840 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms