Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.58■□□□□ 0.56
THBS4P35443 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS4P35443 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
THBS4P35443 AC104564.3-201ENST00000582367 638 ntBASIC18.58■□□□□ 0.56
THBS4P35443 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS4P35443 AC092666.2-201ENST00000613287 246 ntBASIC18.58■□□□□ 0.56
THBS4P35443 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.58■□□□□ 0.56
THBS4P35443 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS4P35443 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS4P35443 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS4P35443 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS4P35443 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.58■□□□□ 0.56
THBS4P35443 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
THBS4P35443 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.57■□□□□ 0.56
THBS4P35443 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
THBS4P35443 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS4P35443 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.57■□□□□ 0.56
THBS4P35443 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS4P35443 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
THBS4P35443 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THBS4P35443 KRT18P5-201ENST00000436075 1291 ntBASIC18.57■□□□□ 0.56
THBS4P35443 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.57■□□□□ 0.56
THBS4P35443 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.57■□□□□ 0.56
THBS4P35443 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.57■□□□□ 0.56
THBS4P35443 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS4P35443 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS4P35443 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
THBS4P35443 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.57■□□□□ 0.56
THBS4P35443 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS4P35443 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
THBS4P35443 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.56■□□□□ 0.56
THBS4P35443 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.56■□□□□ 0.56
THBS4P35443 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.56■□□□□ 0.56
THBS4P35443 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
THBS4P35443 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.56■□□□□ 0.56
THBS4P35443 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
THBS4P35443 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS4P35443 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
THBS4P35443 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS4P35443 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.55■□□□□ 0.56
THBS4P35443 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.55■□□□□ 0.56
THBS4P35443 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS4P35443 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS4P35443 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
THBS4P35443 NTF6G-201ENST00000591094 616 ntBASIC18.54■□□□□ 0.56
THBS4P35443 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
THBS4P35443 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS4P35443 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
THBS4P35443 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
THBS4P35443 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
THBS4P35443 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.53■□□□□ 0.56
THBS4P35443 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS4P35443 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
THBS4P35443 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
THBS4P35443 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS4P35443 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS4P35443 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS4P35443 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS4P35443 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
THBS4P35443 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.53■□□□□ 0.56
THBS4P35443 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THBS4P35443 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms