Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EPHA3P29320 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA3P29320 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHA3P29320 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
EPHA3P29320 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHA3P29320 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA3P29320 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA3P29320 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA3P29320 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA3P29320 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EPHA3P29320 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EPHA3P29320 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
EPHA3P29320 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
EPHA3P29320 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA3P29320 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHA3P29320 AP004607.7-201ENST00000527152 1677 ntBASIC20.52■□□□□ 0.88
EPHA3P29320 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
EPHA3P29320 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 KRT16P3-201ENST00000439127 1283 ntBASIC20.52■□□□□ 0.88
EPHA3P29320 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.52■□□□□ 0.88
EPHA3P29320 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHA3P29320 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
EPHA3P29320 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA3P29320 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
EPHA3P29320 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EPHA3P29320 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.52■□□□□ 0.87
EPHA3P29320 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EPHA3P29320 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
EPHA3P29320 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
EPHA3P29320 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EPHA3P29320 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
EPHA3P29320 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EPHA3P29320 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHA3P29320 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EPHA3P29320 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHA3P29320 AL034346.1-201ENST00000568244 1277 ntBASIC20.51■□□□□ 0.87
EPHA3P29320 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
EPHA3P29320 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EPHA3P29320 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.51■□□□□ 0.87
EPHA3P29320 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA3P29320 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
EPHA3P29320 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA3P29320 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA3P29320 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
EPHA3P29320 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.5■□□□□ 0.87
EPHA3P29320 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.5■□□□□ 0.87
EPHA3P29320 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.5■□□□□ 0.87
EPHA3P29320 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
EPHA3P29320 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.5■□□□□ 0.87
EPHA3P29320 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EPHA3P29320 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA3P29320 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA3P29320 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA3P29320 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.5■□□□□ 0.87
EPHA3P29320 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA3P29320 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA3P29320 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA3P29320 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.49■□□□□ 0.87
EPHA3P29320 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
EPHA3P29320 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.49■□□□□ 0.87
EPHA3P29320 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
EPHA3P29320 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA3P29320 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA3P29320 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA3P29320 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHA3P29320 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EPHA3P29320 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms