Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 ERP1YAR002C-A 660 nt3.85□□□□□ -1.79
MSH1P25846 REH1YLR387C 1299 nt3.85□□□□□ -1.79
MSH1P25846 RRG7YOR305W 729 nt3.85□□□□□ -1.79
MSH1P25846 YDR170W-AYDR170W-A 1323 nt3.85□□□□□ -1.79
MSH1P25846 YBL005W-AYBL005W-A 1323 nt3.85□□□□□ -1.79
MSH1P25846 YMR046CYMR046C 1323 nt3.85□□□□□ -1.79
MSH1P25846 YBP2YGL060W 1926 nt3.84□□□□□ -1.79
MSH1P25846 NOG1YPL093W 1944 nt3.84□□□□□ -1.79
MSH1P25846 RPS8BYER102W 603 nt3.84□□□□□ -1.79
MSH1P25846 CNN1YFR046C 1086 nt3.84□□□□□ -1.79
MSH1P25846 LST7YGR057C 729 nt3.84□□□□□ -1.79
MSH1P25846 AIM18YHR198C 966 nt3.84□□□□□ -1.79
MSH1P25846 YJL114WYJL114W 681 nt3.84□□□□□ -1.79
MSH1P25846 YKL115CYKL115C 393 nt3.84□□□□□ -1.79
MSH1P25846 NNT1YLR285W 786 nt3.84□□□□□ -1.79
MSH1P25846 FAR3YMR052W 615 nt3.84□□□□□ -1.79
MSH1P25846 VPS20YMR077C 666 nt3.84□□□□□ -1.79
MSH1P25846 ERG2YMR202W 669 nt3.84□□□□□ -1.79
MSH1P25846 RPS8AYBL072C 603 nt3.84□□□□□ -1.79
MSH1P25846 MCA1YOR197W 1299 nt3.84□□□□□ -1.79
MSH1P25846 YJR030CYJR030C 2238 nt3.84□□□□□ -1.79
MSH1P25846 SSL1YLR005W 1386 nt3.84□□□□□ -1.79
MSH1P25846 DUN1YDL101C 1542 nt3.84□□□□□ -1.8
MSH1P25846 FKH2YNL068C 2589 nt3.84□□□□□ -1.8
MSH1P25846 RIM1YCR028C-A 408 nt3.83□□□□□ -1.8
MSH1P25846 NRG1YDR043C 696 nt3.83□□□□□ -1.8
MSH1P25846 UBC13YDR092W 462 nt3.83□□□□□ -1.8
MSH1P25846 HTA1YDR225W 399 nt3.83□□□□□ -1.8
MSH1P25846 YHL048C-AYHL048C-A 135 nt3.83□□□□□ -1.8
MSH1P25846 HMX1YLR205C 954 nt3.83□□□□□ -1.8
MSH1P25846 YLR271WYLR271W 825 nt3.83□□□□□ -1.8
MSH1P25846 BRX1YOL077C 876 nt3.83□□□□□ -1.8
MSH1P25846 DGA1YOR245C 1257 nt3.83□□□□□ -1.8
MSH1P25846 YPR153WYPR153W 423 nt3.83□□□□□ -1.8
MSH1P25846 TRM82YDR165W 1335 nt3.83□□□□□ -1.8
MSH1P25846 NOP56YLR197W 1515 nt3.83□□□□□ -1.8
MSH1P25846 PPQ1YPL179W 1650 nt3.83□□□□□ -1.8
MSH1P25846 RDS1YCR106W 2499 nt3.83□□□□□ -1.8
MSH1P25846 PEX6YNL329C 3093 nt3.82□□□□□ -1.8
MSH1P25846 APC5YOR249C 2058 nt3.82□□□□□ -1.8
MSH1P25846 STP1YDR463W 1560 nt3.82□□□□□ -1.8
MSH1P25846 FRQ1YDR373W 573 nt3.82□□□□□ -1.8
MSH1P25846 VAB2YEL005C 849 nt3.82□□□□□ -1.8
MSH1P25846 YER158W-AYER158W-A 216 nt3.82□□□□□ -1.8
MSH1P25846 YGL152CYGL152C 678 nt3.82□□□□□ -1.8
MSH1P25846 BRR6YGL247W 594 nt3.82□□□□□ -1.8
MSH1P25846 YJR020WYJR020W 333 nt3.82□□□□□ -1.8
MSH1P25846 CAP1YKL007W 807 nt3.82□□□□□ -1.8
MSH1P25846 RAD33YML011C 534 nt3.82□□□□□ -1.8
MSH1P25846 YPR108W-AYPR108W-A 213 nt3.82□□□□□ -1.8
MSH1P25846 SLA1YBL007C 3735 nt3.82□□□□□ -1.8
MSH1P25846 ARP5YNL059C 2268 nt3.82□□□□□ -1.8
MSH1P25846 LCB5YLR260W 2064 nt3.82□□□□□ -1.8
MSH1P25846 CHK1YBR274W 1584 nt3.81□□□□□ -1.8
MSH1P25846 YDR271CYDR271C 372 nt3.81□□□□□ -1.8
MSH1P25846 IES6YEL044W 501 nt3.81□□□□□ -1.8
MSH1P25846 PGD1YGL025C 1194 nt3.81□□□□□ -1.8
MSH1P25846 PDX1YGR193C 1233 nt3.81□□□□□ -1.8
MSH1P25846 GEP4YHR100C 558 nt3.81□□□□□ -1.8
MSH1P25846 FUR1YHR128W 651 nt3.81□□□□□ -1.8
MSH1P25846 RPA12YJR063W 378 nt3.81□□□□□ -1.8
MSH1P25846 YKL091CYKL091C 933 nt3.81□□□□□ -1.8
MSH1P25846 RPS21AYKR057W 264 nt3.81□□□□□ -1.8
MSH1P25846 RNH203YLR154C 333 nt3.81□□□□□ -1.8
MSH1P25846 snR24snR24 89 nt3.81□□□□□ -1.8
MSH1P25846 CDC45YLR103C 1953 nt3.81□□□□□ -1.8
MSH1P25846 CAF130YGR134W 3369 nt3.81□□□□□ -1.8
MSH1P25846 STU1YBL034C 4542 nt3.81□□□□□ -1.8
MSH1P25846 REB1YBR049C 2433 nt3.81□□□□□ -1.8
MSH1P25846 AGE1YDR524C 1449 nt3.8□□□□□ -1.8
MSH1P25846 COP1YDL145C 3606 nt3.8□□□□□ -1.8
MSH1P25846 PKH1YDR490C 2301 nt3.8□□□□□ -1.8
MSH1P25846 RMD6YEL072W 696 nt3.8□□□□□ -1.8
MSH1P25846 YEL075CYEL075C 369 nt3.8□□□□□ -1.8
MSH1P25846 RPS0AYGR214W 759 nt3.8□□□□□ -1.8
MSH1P25846 LIN1YHR156C 1023 nt3.8□□□□□ -1.8
MSH1P25846 YKL123WYKL123W 381 nt3.8□□□□□ -1.8
MSH1P25846 GIM5YML094W 492 nt3.8□□□□□ -1.8
MSH1P25846 YBR201C-AYBR201C-A 204 nt3.8□□□□□ -1.8
MSH1P25846 PSP1YDR505C 2526 nt3.8□□□□□ -1.8
MSH1P25846 HDA2YDR295C 2025 nt3.8□□□□□ -1.8
MSH1P25846 AEP1YMR064W 1557 nt3.8□□□□□ -1.8
MSH1P25846 BAR1YIL015W 1764 nt3.79□□□□□ -1.8
MSH1P25846 YDR149CYDR149C 708 nt3.79□□□□□ -1.8
MSH1P25846 YDR381C-AYDR381C-A 345 nt3.79□□□□□ -1.8
MSH1P25846 GRX2YDR513W 432 nt3.79□□□□□ -1.8
MSH1P25846 YEL032C-AYEL032C-A 162 nt3.79□□□□□ -1.8
MSH1P25846 ECO1YFR027W 846 nt3.79□□□□□ -1.8
MSH1P25846 YGR160WYGR160W 612 nt3.79□□□□□ -1.8
MSH1P25846 GOS1YHL031C 672 nt3.79□□□□□ -1.8
MSH1P25846 FLD1YLR404W 858 nt3.79□□□□□ -1.8
MSH1P25846 GIS2YNL255C 462 nt3.79□□□□□ -1.8
MSH1P25846 SRL1YOR247W 633 nt3.79□□□□□ -1.8
MSH1P25846 SYT1YPR095C 3681 nt3.79□□□□□ -1.8
MSH1P25846 FAP7YDL166C 594 nt3.78□□□□□ -1.8
MSH1P25846 ARF1YDL192W 546 nt3.78□□□□□ -1.8
MSH1P25846 LOC1YFR001W 615 nt3.78□□□□□ -1.8
MSH1P25846 YFH7YFR007W 1062 nt3.78□□□□□ -1.8
MSH1P25846 PAU13YHL046C 363 nt3.78□□□□□ -1.8
MSH1P25846 IGO2YHR132W-A 396 nt3.78□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 103.1 ms