Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 RPS29BYDL061C 171 nt2□□□□□ -2.09
CDC39P25655 YHR213WYHR213W 597 nt2□□□□□ -2.09
CDC39P25655 YAR062WYAR062W 597 nt2□□□□□ -2.09
CDC39P25655 MET6YER091C 2304 nt2□□□□□ -2.09
CDC39P25655 MSM1YGR171C 1728 nt2□□□□□ -2.09
CDC39P25655 AEP2YMR282C 1743 nt2□□□□□ -2.09
CDC39P25655 TPS2YDR074W 2691 nt2□□□□□ -2.09
CDC39P25655 RRP1YDR087C 837 nt2□□□□□ -2.09
CDC39P25655 YER165C-AYER165C-A 357 nt2□□□□□ -2.09
CDC39P25655 PEX21YGR239C 867 nt2□□□□□ -2.09
CDC39P25655 RPC17YJL011C 486 nt2□□□□□ -2.09
CDC39P25655 GDI1YER136W 1356 nt2□□□□□ -2.09
CDC39P25655 POL1YNL102W 4407 nt2□□□□□ -2.09
CDC39P25655 YPK3YBR028C 1578 nt2□□□□□ -2.09
CDC39P25655 CIR1YGR207C 786 nt1.99□□□□□ -2.09
CDC39P25655 YMR194C-AYMR194C-A 225 nt1.99□□□□□ -2.09
CDC39P25655 BTS1YPL069C 1008 nt1.99□□□□□ -2.09
CDC39P25655 DAD3YBR233W-A 285 nt1.99□□□□□ -2.09
CDC39P25655 CLN3YAL040C 1743 nt1.99□□□□□ -2.09
CDC39P25655 RIX1YHR197W 2292 nt1.99□□□□□ -2.09
CDC39P25655 RKM4YDR257C 1485 nt1.99□□□□□ -2.09
CDC39P25655 SDT1YGL224C 843 nt1.99□□□□□ -2.09
CDC39P25655 YIL086CYIL086C 309 nt1.99□□□□□ -2.09
CDC39P25655 YLR230WYLR230W 306 nt1.99□□□□□ -2.09
CDC39P25655 PNT1YOR266W 1272 nt1.99□□□□□ -2.09
CDC39P25655 SSY1YDR160W 2559 nt1.98□□□□□ -2.09
CDC39P25655 NCS2YNL119W 1482 nt1.98□□□□□ -2.09
CDC39P25655 YCR007CYCR007C 720 nt1.98□□□□□ -2.09
CDC39P25655 PSY3YLR376C 729 nt1.98□□□□□ -2.09
CDC39P25655 YLR462WYLR462W 609 nt1.98□□□□□ -2.09
CDC39P25655 ATG29YPL166W 642 nt1.98□□□□□ -2.09
CDC39P25655 TRA1YHR099W 11235 nt1.98□□□□□ -2.09
CDC39P25655 NDC80YIL144W 2076 nt1.98□□□□□ -2.09
CDC39P25655 NOP14YDL148C 2433 nt1.98□□□□□ -2.09
CDC39P25655 YDR340WYDR340W 303 nt1.97□□□□□ -2.09
CDC39P25655 YGR039WYGR039W 312 nt1.97□□□□□ -2.09
CDC39P25655 MST28YAR033W 705 nt1.97□□□□□ -2.09
CDC39P25655 ISU1YPL135W 498 nt1.97□□□□□ -2.09
CDC39P25655 MAK21YDR060W 3078 nt1.97□□□□□ -2.09
CDC39P25655 YKR078WYKR078W 1758 nt1.97□□□□□ -2.09
CDC39P25655 HRD3YLR207W 2502 nt1.97□□□□□ -2.09
CDC39P25655 IOC3YFR013W 2364 nt1.97□□□□□ -2.09
CDC39P25655 RMT2YDR465C 1239 nt1.97□□□□□ -2.09
CDC39P25655 GAB1YLR459W 1185 nt1.97□□□□□ -2.09
CDC39P25655 ATP3YBR039W 936 nt1.97□□□□□ -2.09
CDC39P25655 TEC1YBR083W 1461 nt1.97□□□□□ -2.09
CDC39P25655 KAP104YBR017C 2757 nt1.97□□□□□ -2.09
CDC39P25655 YEL009C-AYEL009C-A 408 nt1.96□□□□□ -2.1
CDC39P25655 YKL066WYKL066W 444 nt1.96□□□□□ -2.1
CDC39P25655 YLR416CYLR416C 399 nt1.96□□□□□ -2.1
CDC39P25655 REG2YBR050C 1017 nt1.96□□□□□ -2.1
CDC39P25655 TFC3YAL001C 3483 nt1.96□□□□□ -2.1
CDC39P25655 CIK1YMR198W 1785 nt1.96□□□□□ -2.1
CDC39P25655 YCR064CYCR064C 411 nt1.96□□□□□ -2.1
CDC39P25655 SIC1YLR079W 855 nt1.96□□□□□ -2.1
CDC39P25655 YCL007CYCL007C 393 nt1.96□□□□□ -2.1
CDC39P25655 CWC22YGR278W 1734 nt1.96□□□□□ -2.1
CDC39P25655 YJL181WYJL181W 1836 nt1.95□□□□□ -2.1
CDC39P25655 CAF120YNL278W 3183 nt1.95□□□□□ -2.1
CDC39P25655 SPO74YGL170C 1242 nt1.95□□□□□ -2.1
CDC39P25655 ERV29YGR284C 933 nt1.95□□□□□ -2.1
CDC39P25655 YAL026C-AYAL026C-A 438 nt1.95□□□□□ -2.1
CDC39P25655 INP53YOR109W 3324 nt1.95□□□□□ -2.1
CDC39P25655 SAP190YKR028W 3102 nt1.95□□□□□ -2.1
CDC39P25655 RIF1YBR275C 5751 nt1.95□□□□□ -2.1
CDC39P25655 YIG1YPL201C 1386 nt1.95□□□□□ -2.1
CDC39P25655 KRE2YDR483W 1329 nt1.95□□□□□ -2.1
CDC39P25655 CUS1YMR240C 1311 nt1.95□□□□□ -2.1
CDC39P25655 RPL27BYDR471W 411 nt1.94□□□□□ -2.1
CDC39P25655 ERG25YGR060W 930 nt1.94□□□□□ -2.1
CDC39P25655 YOL079WYOL079W 399 nt1.94□□□□□ -2.1
CDC39P25655 HHF1YBR009C 312 nt1.94□□□□□ -2.1
CDC39P25655 YOR082CYOR082C 342 nt1.94□□□□□ -2.1
CDC39P25655 ICR1ICR1 3199 nt1.94□□□□□ -2.1
CDC39P25655 BRP1YGL007W 378 nt1.94□□□□□ -2.1
CDC39P25655 YGL159WYGL159W 1113 nt1.94□□□□□ -2.1
CDC39P25655 VPS51YKR020W 495 nt1.94□□□□□ -2.1
CDC39P25655 CYC2YOR037W 1101 nt1.94□□□□□ -2.1
CDC39P25655 YBR138CYBR138C 1575 nt1.94□□□□□ -2.1
CDC39P25655 ALK2YBL009W 2031 nt1.93□□□□□ -2.1
CDC39P25655 CLB5YPR120C 1308 nt1.93□□□□□ -2.1
CDC39P25655 SCD5YOR329C 2619 nt1.93□□□□□ -2.1
CDC39P25655 RSA3YLR221C 663 nt1.93□□□□□ -2.1
CDC39P25655 SEC65YML105C 822 nt1.93□□□□□ -2.1
CDC39P25655 SSU72YNL222W 621 nt1.93□□□□□ -2.1
CDC39P25655 MPP6YNR024W 561 nt1.93□□□□□ -2.1
CDC39P25655 YOR277CYOR277C 309 nt1.93□□□□□ -2.1
CDC39P25655 RED1YLR263W 2484 nt1.93□□□□□ -2.1
CDC39P25655 EXO84YBR102C 2262 nt1.93□□□□□ -2.1
CDC39P25655 MIP6YHR015W 1980 nt1.93□□□□□ -2.1
CDC39P25655 GRX2YDR513W 432 nt1.93□□□□□ -2.1
CDC39P25655 MRPL49YJL096W 486 nt1.93□□□□□ -2.1
CDC39P25655 AIM41YOR215C 558 nt1.93□□□□□ -2.1
CDC39P25655 CLN2YPL256C 1638 nt1.93□□□□□ -2.1
CDC39P25655 MAK5YBR142W 2322 nt1.92□□□□□ -2.1
CDC39P25655 INO80YGL150C 4470 nt1.92□□□□□ -2.1
CDC39P25655 RPC11YDR045C 333 nt1.92□□□□□ -2.1
CDC39P25655 EMP24YGL200C 612 nt1.92□□□□□ -2.1
CDC39P25655 TAF4YMR005W 1167 nt1.92□□□□□ -2.1
CDC39P25655 ESL2YKR096W 3588 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms