Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COX4I1P13073 RNF165-205ENST00000588679 2904 ntBASIC20.36■□□□□ 0.85
COX4I1P13073 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COX4I1P13073 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COX4I1P13073 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COX4I1P13073 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.36■□□□□ 0.85
COX4I1P13073 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.36■□□□□ 0.85
COX4I1P13073 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.36■□□□□ 0.85
COX4I1P13073 AC092028.1-203ENST00000608262 953 ntBASIC20.36■□□□□ 0.85
COX4I1P13073 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COX4I1P13073 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COX4I1P13073 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COX4I1P13073 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.36■□□□□ 0.85
COX4I1P13073 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.36■□□□□ 0.85
COX4I1P13073 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COX4I1P13073 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COX4I1P13073 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.35■□□□□ 0.85
COX4I1P13073 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.35■□□□□ 0.85
COX4I1P13073 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 AC133637.1-201ENST00000624115 1537 ntBASIC20.35■□□□□ 0.85
COX4I1P13073 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 AL391422.3-201ENST00000603791 2761 ntBASIC20.35■□□□□ 0.85
COX4I1P13073 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.35■□□□□ 0.85
COX4I1P13073 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COX4I1P13073 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COX4I1P13073 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.34■□□□□ 0.85
COX4I1P13073 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.34■□□□□ 0.85
COX4I1P13073 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
COX4I1P13073 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
COX4I1P13073 AC003102.1-202ENST00000563394 1796 ntBASIC20.34■□□□□ 0.85
COX4I1P13073 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COX4I1P13073 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COX4I1P13073 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COX4I1P13073 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COX4I1P13073 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.33■□□□□ 0.85
COX4I1P13073 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COX4I1P13073 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.33■□□□□ 0.85
COX4I1P13073 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COX4I1P13073 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.33■□□□□ 0.85
COX4I1P13073 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COX4I1P13073 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COX4I1P13073 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
COX4I1P13073 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.33■□□□□ 0.85
COX4I1P13073 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
COX4I1P13073 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.33■□□□□ 0.84
COX4I1P13073 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
COX4I1P13073 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COX4I1P13073 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
COX4I1P13073 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COX4I1P13073 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COX4I1P13073 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.32■□□□□ 0.84
COX4I1P13073 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.32■□□□□ 0.84
COX4I1P13073 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.32■□□□□ 0.84
COX4I1P13073 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 Z92544.1-202ENST00000571933 1220 ntBASIC20.32■□□□□ 0.84
COX4I1P13073 MTDHP2-201ENST00000601468 714 ntBASIC20.32■□□□□ 0.84
COX4I1P13073 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COX4I1P13073 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
COX4I1P13073 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.32■□□□□ 0.84
COX4I1P13073 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.32■□□□□ 0.84
COX4I1P13073 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COX4I1P13073 PLK5-205ENST00000642079 1969 ntBASIC20.32■□□□□ 0.84
COX4I1P13073 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
COX4I1P13073 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.31■□□□□ 0.84
COX4I1P13073 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
COX4I1P13073 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.31■□□□□ 0.84
COX4I1P13073 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.31■□□□□ 0.84
COX4I1P13073 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COX4I1P13073 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.31■□□□□ 0.84
COX4I1P13073 AFG3L1P-217ENST00000557444 2447 ntBASIC20.31■□□□□ 0.84
COX4I1P13073 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.31■□□□□ 0.84
COX4I1P13073 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms