Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
ZNF728P0DKX0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 RASA4CP-201ENST00000424092 1398 ntBASIC17.95■□□□□ 0.46
ZNF728P0DKX0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 AC091305.1-201ENST00000479476 895 ntBASIC17.95■□□□□ 0.46
ZNF728P0DKX0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 AC142381.2-201ENST00000566120 298 ntBASIC17.95■□□□□ 0.46
ZNF728P0DKX0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 AC005837.3-201ENST00000612163 286 ntBASIC17.95■□□□□ 0.46
ZNF728P0DKX0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF728P0DKX0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 FEM1AP4-201ENST00000443167 1987 ntBASIC17.94■□□□□ 0.46
ZNF728P0DKX0 MIR638-201ENST00000385237 100 ntBASIC17.94■□□□□ 0.46
ZNF728P0DKX0 SUDS3P1-201ENST00000505831 966 ntBASIC17.94■□□□□ 0.46
ZNF728P0DKX0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 AL136967.2-201ENST00000623968 743 ntBASIC17.94■□□□□ 0.46
ZNF728P0DKX0 AC073130.3-201ENST00000624389 2278 ntBASIC17.94■□□□□ 0.46
ZNF728P0DKX0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF728P0DKX0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.93■□□□□ 0.46
ZNF728P0DKX0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF728P0DKX0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 AF106564.1-201ENST00000607058 2553 ntBASIC17.92■□□□□ 0.46
ZNF728P0DKX0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF728P0DKX0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 IGHV3-19-201ENST00000521488 291 ntBASIC17.91■□□□□ 0.46
ZNF728P0DKX0 AC079089.2-201ENST00000531211 1277 ntBASIC17.91■□□□□ 0.46
ZNF728P0DKX0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 OXCT2P1-201ENST00000447263 1535 ntBASIC17.91■□□□□ 0.46
ZNF728P0DKX0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF728P0DKX0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms