Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCNYL3P0C7X3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL3P0C7X3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCNYL3P0C7X3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
CCNYL3P0C7X3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCNYL3P0C7X3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCNYL3P0C7X3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 CROCCP5-201ENST00000436658 830 ntBASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 AL109923.1-201ENST00000618799 583 ntBASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 AP004607.7-201ENST00000527152 1677 ntBASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
CCNYL3P0C7X3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 OR7E47P-201ENST00000546390 1422 ntBASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 AL034346.1-201ENST00000568244 1277 ntBASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCNYL3P0C7X3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 AC231657.2-201ENST00000624556 255 ntBASIC20.29■□□□□ 0.84
CCNYL3P0C7X3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms