Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FREM3P0C091 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM3P0C091 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
FREM3P0C091 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM3P0C091 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.26■□□□□ 0.67
FREM3P0C091 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.26■□□□□ 0.67
FREM3P0C091 MYCNOS-205ENST00000641950 531 ntBASIC19.26■□□□□ 0.67
FREM3P0C091 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM3P0C091 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM3P0C091 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.26■□□□□ 0.67
FREM3P0C091 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FREM3P0C091 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.26■□□□□ 0.67
FREM3P0C091 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.26■□□□□ 0.67
FREM3P0C091 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.25■□□□□ 0.67
FREM3P0C091 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.25■□□□□ 0.67
FREM3P0C091 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
FREM3P0C091 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FREM3P0C091 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FREM3P0C091 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.25■□□□□ 0.67
FREM3P0C091 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM3P0C091 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM3P0C091 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FREM3P0C091 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM3P0C091 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.25■□□□□ 0.67
FREM3P0C091 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.25■□□□□ 0.67
FREM3P0C091 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FREM3P0C091 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.24■□□□□ 0.67
FREM3P0C091 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 KRT18P20-201ENST00000548986 1279 ntBASIC19.24■□□□□ 0.67
FREM3P0C091 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
FREM3P0C091 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 LINC02228-203ENST00000641970 1355 ntBASIC19.24■□□□□ 0.67
FREM3P0C091 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FREM3P0C091 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FREM3P0C091 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.24■□□□□ 0.67
FREM3P0C091 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
FREM3P0C091 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FREM3P0C091 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.24■□□□□ 0.67
FREM3P0C091 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.24■□□□□ 0.67
FREM3P0C091 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.24■□□□□ 0.67
FREM3P0C091 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.24■□□□□ 0.67
FREM3P0C091 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.23■□□□□ 0.67
FREM3P0C091 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FREM3P0C091 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 ID1-201ENST00000376105 1233 ntBASIC19.23■□□□□ 0.67
FREM3P0C091 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
FREM3P0C091 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 AC073111.5-205ENST00000641717 521 ntBASIC19.23■□□□□ 0.67
FREM3P0C091 FBXW4P1-201ENST00000426721 2239 ntBASIC19.23■□□□□ 0.67
FREM3P0C091 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
FREM3P0C091 AC003102.1-202ENST00000563394 1796 ntBASIC19.23■□□□□ 0.67
FREM3P0C091 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM3P0C091 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
FREM3P0C091 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
FREM3P0C091 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.22■□□□□ 0.67
FREM3P0C091 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.22■□□□□ 0.67
FREM3P0C091 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.22■□□□□ 0.67
FREM3P0C091 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.22■□□□□ 0.67
FREM3P0C091 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM3P0C091 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM3P0C091 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM3P0C091 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM3P0C091 AC007375.3-201ENST00000600936 2314 ntBASIC19.22■□□□□ 0.67
FREM3P0C091 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.22■□□□□ 0.67
FREM3P0C091 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM3P0C091 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.22■□□□□ 0.67
FREM3P0C091 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM3P0C091 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
FREM3P0C091 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.22■□□□□ 0.67
FREM3P0C091 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FREM3P0C091 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.21■□□□□ 0.67
FREM3P0C091 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM3P0C091 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FREM3P0C091 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FREM3P0C091 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM3P0C091 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM3P0C091 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.21■□□□□ 0.67
FREM3P0C091 BID-214ENST00000617586 542 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM3P0C091 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.2■□□□□ 0.66
FREM3P0C091 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.2■□□□□ 0.66
FREM3P0C091 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM3P0C091 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.2■□□□□ 0.66
FREM3P0C091 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.2■□□□□ 0.66
FREM3P0C091 AC010141.2-201ENST00000452426 721 ntBASIC19.2■□□□□ 0.66
FREM3P0C091 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms