Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBP1P09455 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBP1P09455 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.81■□□□□ 0.92
RBP1P09455 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.81■□□□□ 0.92
RBP1P09455 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.81■□□□□ 0.92
RBP1P09455 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.81■□□□□ 0.92
RBP1P09455 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBP1P09455 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.81■□□□□ 0.92
RBP1P09455 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.81■□□□□ 0.92
RBP1P09455 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RBP1P09455 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBP1P09455 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.8■□□□□ 0.92
RBP1P09455 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.8■□□□□ 0.92
RBP1P09455 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RBP1P09455 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RBP1P09455 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RBP1P09455 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RBP1P09455 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.8■□□□□ 0.92
RBP1P09455 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.8■□□□□ 0.92
RBP1P09455 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RBP1P09455 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RBP1P09455 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RBP1P09455 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RBP1P09455 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RBP1P09455 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 AC126544.1-201ENST00000580842 1059 ntBASIC20.79■□□□□ 0.92
RBP1P09455 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.79■□□□□ 0.92
RBP1P09455 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBP1P09455 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.78■□□□□ 0.92
RBP1P09455 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RBP1P09455 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.78■□□□□ 0.92
RBP1P09455 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.78■□□□□ 0.92
RBP1P09455 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.78■□□□□ 0.92
RBP1P09455 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.78■□□□□ 0.92
RBP1P09455 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RBP1P09455 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RBP1P09455 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBP1P09455 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.77■□□□□ 0.92
RBP1P09455 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.77■□□□□ 0.92
RBP1P09455 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBP1P09455 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBP1P09455 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RBP1P09455 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.77■□□□□ 0.92
RBP1P09455 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
RBP1P09455 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.77■□□□□ 0.92
RBP1P09455 AC024257.2-201ENST00000549699 147 ntBASIC20.77■□□□□ 0.92
RBP1P09455 AL136162.1-201ENST00000607711 1078 ntBASIC20.77■□□□□ 0.92
RBP1P09455 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RBP1P09455 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RBP1P09455 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RBP1P09455 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RBP1P09455 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RBP1P09455 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RBP1P09455 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.76■□□□□ 0.91
RBP1P09455 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RBP1P09455 IGHV3-19-201ENST00000521488 291 ntBASIC20.76■□□□□ 0.91
RBP1P09455 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.76■□□□□ 0.91
RBP1P09455 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.76■□□□□ 0.91
RBP1P09455 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms