Protein–RNA interactions for Protein: P06401

PGR, Progesterone receptor, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGRP06401 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PGRP06401 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PGRP06401 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PGRP06401 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PGRP06401 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PGRP06401 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PGRP06401 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.1■□□□□ 0.81
PGRP06401 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.1■□□□□ 0.81
PGRP06401 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.1■□□□□ 0.81
PGRP06401 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.1■□□□□ 0.81
PGRP06401 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGRP06401 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
PGRP06401 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.09■□□□□ 0.81
PGRP06401 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
PGRP06401 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PGRP06401 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.09■□□□□ 0.81
PGRP06401 LINC01521-201ENST00000504184 1943 ntBASIC20.09■□□□□ 0.81
PGRP06401 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PGRP06401 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PGRP06401 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PGRP06401 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGRP06401 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGRP06401 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.08■□□□□ 0.81
PGRP06401 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGRP06401 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.08■□□□□ 0.81
PGRP06401 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PGRP06401 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGRP06401 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGRP06401 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.08■□□□□ 0.81
PGRP06401 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.08■□□□□ 0.81
PGRP06401 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.08■□□□□ 0.81
PGRP06401 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.08■□□□□ 0.8
PGRP06401 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.8
PGRP06401 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
PGRP06401 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGRP06401 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.07■□□□□ 0.8
PGRP06401 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.07■□□□□ 0.8
PGRP06401 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.07■□□□□ 0.8
PGRP06401 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.07■□□□□ 0.8
PGRP06401 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.07■□□□□ 0.8
PGRP06401 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PGRP06401 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.07■□□□□ 0.8
PGRP06401 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PGRP06401 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PGRP06401 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGRP06401 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.06■□□□□ 0.8
PGRP06401 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.06■□□□□ 0.8
PGRP06401 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGRP06401 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PGRP06401 SMUG1P1-201ENST00000590640 811 ntBASIC20.06■□□□□ 0.8
PGRP06401 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.06■□□□□ 0.8
PGRP06401 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.06■□□□□ 0.8
PGRP06401 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms