Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TCRAP04437 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRAP04437 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.07■□□□□ 0.16
TCRAP04437 AL117332.1-201ENST00000622628 974 ntBASIC16.07■□□□□ 0.16
TCRAP04437 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TCRAP04437 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TCRAP04437 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TCRAP04437 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TCRAP04437 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TCRAP04437 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TCRAP04437 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TCRAP04437 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRAP04437 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TCRAP04437 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TCRAP04437 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.06■□□□□ 0.16
TCRAP04437 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TCRAP04437 AL034346.1-201ENST00000568244 1277 ntBASIC16.06■□□□□ 0.16
TCRAP04437 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TCRAP04437 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
TCRAP04437 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.06■□□□□ 0.16
TCRAP04437 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRAP04437 GABARAPL3-202ENST00000624044 1851 ntBASIC16.05■□□□□ 0.16
TCRAP04437 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRAP04437 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRAP04437 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TCRAP04437 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TCRAP04437 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRAP04437 pRNA.6-201ENST00000610482 90 ntBASIC16.05■□□□□ 0.16
TCRAP04437 pRNA.5-201ENST00000612139 90 ntBASIC16.05■□□□□ 0.16
TCRAP04437 pRNA.11-201ENST00000618423 90 ntBASIC16.05■□□□□ 0.16
TCRAP04437 pRNA.13-201ENST00000619112 90 ntBASIC16.05■□□□□ 0.16
TCRAP04437 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TCRAP04437 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRAP04437 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRAP04437 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRAP04437 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRAP04437 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.04■□□□□ 0.16
TCRAP04437 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRAP04437 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TCRAP04437 MIR4787-201ENST00000607364 84 ntBASIC16.04■□□□□ 0.16
TCRAP04437 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRAP04437 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRAP04437 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TCRAP04437 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 AC003102.1-202ENST00000563394 1796 ntBASIC16.03■□□□□ 0.16
TCRAP04437 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
TCRAP04437 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.03■□□□□ 0.16
TCRAP04437 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TCRAP04437 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRAP04437 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRAP04437 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms