Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.72■□□□□ 0.75
PDGFAP04085 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFAP04085 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFAP04085 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.72■□□□□ 0.75
PDGFAP04085 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFAP04085 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFAP04085 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFAP04085 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PDGFAP04085 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 AC093827.2-201ENST00000512654 315 ntBASIC19.71■□□□□ 0.75
PDGFAP04085 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFAP04085 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFAP04085 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFAP04085 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PDGFAP04085 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
PDGFAP04085 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFAP04085 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PDGFAP04085 AC138907.5-202ENST00000569484 235 ntBASIC19.7■□□□□ 0.74
PDGFAP04085 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.7■□□□□ 0.74
PDGFAP04085 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFAP04085 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFAP04085 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFAP04085 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PDGFAP04085 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.69■□□□□ 0.74
PDGFAP04085 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFAP04085 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PDGFAP04085 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFAP04085 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFAP04085 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFAP04085 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDGFAP04085 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PDGFAP04085 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.68■□□□□ 0.74
PDGFAP04085 POU5F1P3-201ENST00000428824 1078 ntBASIC19.68■□□□□ 0.74
PDGFAP04085 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDGFAP04085 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFAP04085 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.67■□□□□ 0.74
PDGFAP04085 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PDGFAP04085 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.67■□□□□ 0.74
PDGFAP04085 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PDGFAP04085 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.67■□□□□ 0.74
PDGFAP04085 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.67■□□□□ 0.74
PDGFAP04085 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.67■□□□□ 0.74
PDGFAP04085 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.67■□□□□ 0.74
PDGFAP04085 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFAP04085 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
PDGFAP04085 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFAP04085 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFAP04085 CYP2T1P-201ENST00000432607 1285 ntBASIC19.66■□□□□ 0.74
PDGFAP04085 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 RNA5SP413-201ENST00000516373 109 ntBASIC19.66■□□□□ 0.74
PDGFAP04085 AC079089.2-201ENST00000531211 1277 ntBASIC19.66■□□□□ 0.74
PDGFAP04085 KRT18P20-201ENST00000548986 1279 ntBASIC19.66■□□□□ 0.74
PDGFAP04085 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFAP04085 AC068338.2-201ENST00000563278 1430 ntBASIC19.66■□□□□ 0.74
PDGFAP04085 AP004607.7-201ENST00000527152 1677 ntBASIC19.65■□□□□ 0.74
PDGFAP04085 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms