Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
MT-ND3P03897 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.46■■□□□ 1.03
MT-ND3P03897 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
MT-ND3P03897 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.46■■□□□ 1.03
MT-ND3P03897 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.46■■□□□ 1.03
MT-ND3P03897 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.46■■□□□ 1.03
MT-ND3P03897 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
MT-ND3P03897 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND3P03897 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.46■■□□□ 1.03
MT-ND3P03897 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
MT-ND3P03897 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
MT-ND3P03897 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MT-ND3P03897 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MT-ND3P03897 AL157384.1-201ENST00000445995 2473 ntBASIC21.45■■□□□ 1.02
MT-ND3P03897 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
MT-ND3P03897 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.45■■□□□ 1.02
MT-ND3P03897 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.45■■□□□ 1.02
MT-ND3P03897 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MT-ND3P03897 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MT-ND3P03897 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.45■■□□□ 1.02
MT-ND3P03897 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.44■■□□□ 1.02
MT-ND3P03897 AC136469.2-201ENST00000623944 1028 ntBASIC21.44■■□□□ 1.02
MT-ND3P03897 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
MT-ND3P03897 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MT-ND3P03897 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.44■■□□□ 1.02
MT-ND3P03897 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.44■■□□□ 1.02
MT-ND3P03897 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND3P03897 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
MT-ND3P03897 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.44■■□□□ 1.02
MT-ND3P03897 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
MT-ND3P03897 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND3P03897 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.43■■□□□ 1.02
MT-ND3P03897 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND3P03897 AC133637.1-201ENST00000624115 1537 ntBASIC21.43■■□□□ 1.02
MT-ND3P03897 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND3P03897 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
MT-ND3P03897 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND3P03897 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND3P03897 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND3P03897 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND3P03897 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND3P03897 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
MT-ND3P03897 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.42■■□□□ 1.02
MT-ND3P03897 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
MT-ND3P03897 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
MT-ND3P03897 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND3P03897 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.42■■□□□ 1.02
MT-ND3P03897 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND3P03897 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 LINC01521-201ENST00000504184 1943 ntBASIC21.41■■□□□ 1.02
MT-ND3P03897 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.41■■□□□ 1.02
MT-ND3P03897 MIR5787-201ENST00000611784 55 ntBASIC21.41■■□□□ 1.02
MT-ND3P03897 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND3P03897 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
MT-ND3P03897 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
MT-ND3P03897 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 AC008764.7-201ENST00000593779 1081 ntBASIC21.4■■□□□ 1.02
MT-ND3P03897 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms