Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LMNAP02545 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LMNAP02545 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.99■■□□□ 1.11
LMNAP02545 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.99■■□□□ 1.11
LMNAP02545 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LMNAP02545 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LMNAP02545 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LMNAP02545 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.98■■□□□ 1.11
LMNAP02545 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.98■■□□□ 1.11
LMNAP02545 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
LMNAP02545 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.98■■□□□ 1.11
LMNAP02545 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.98■■□□□ 1.11
LMNAP02545 RPS2P52-201ENST00000469610 820 ntBASIC21.98■■□□□ 1.11
LMNAP02545 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.98■■□□□ 1.11
LMNAP02545 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LMNAP02545 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LMNAP02545 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
LMNAP02545 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.97■■□□□ 1.11
LMNAP02545 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.97■■□□□ 1.11
LMNAP02545 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LMNAP02545 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 DUX4L16-201ENST00000555130 1264 ntBASIC21.97■■□□□ 1.11
LMNAP02545 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
LMNAP02545 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.97■■□□□ 1.11
LMNAP02545 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LMNAP02545 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LMNAP02545 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.96■■□□□ 1.11
LMNAP02545 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.96■■□□□ 1.11
LMNAP02545 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.96■■□□□ 1.11
LMNAP02545 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.96■■□□□ 1.11
LMNAP02545 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LMNAP02545 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LMNAP02545 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
LMNAP02545 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LMNAP02545 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
LMNAP02545 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LMNAP02545 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LMNAP02545 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LMNAP02545 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.95■■□□□ 1.1
LMNAP02545 AC079140.4-201ENST00000507448 529 ntBASIC21.95■■□□□ 1.1
LMNAP02545 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.95■■□□□ 1.1
LMNAP02545 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.95■■□□□ 1.1
LMNAP02545 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LMNAP02545 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LMNAP02545 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LMNAP02545 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LMNAP02545 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LMNAP02545 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LMNAP02545 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LMNAP02545 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.94■■□□□ 1.1
LMNAP02545 RNA5SP413-201ENST00000516373 109 ntBASIC21.94■■□□□ 1.1
LMNAP02545 AF201337.1-201ENST00000520239 748 ntBASIC21.94■■□□□ 1.1
LMNAP02545 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.94■■□□□ 1.1
LMNAP02545 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.94■■□□□ 1.1
LMNAP02545 ALDH1A3-203ENST00000557963 1670 ntBASIC21.94■■□□□ 1.1
LMNAP02545 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.94■■□□□ 1.1
LMNAP02545 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.94■■□□□ 1.1
LMNAP02545 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.94■■□□□ 1.1
LMNAP02545 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.94■■□□□ 1.1
LMNAP02545 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LMNAP02545 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LMNAP02545 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LMNAP02545 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LMNAP02545 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LMNAP02545 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LMNAP02545 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LMNAP02545 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.93■■□□□ 1.1
LMNAP02545 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.93■■□□□ 1.1
LMNAP02545 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LMNAP02545 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LMNAP02545 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.92■■□□□ 1.1
LMNAP02545 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LMNAP02545 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LMNAP02545 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LMNAP02545 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms