Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT6AP02538 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 AF106564.1-201ENST00000607058 2553 ntBASIC20.44■□□□□ 0.86
KRT6AP02538 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT6AP02538 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.44■□□□□ 0.86
KRT6AP02538 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.44■□□□□ 0.86
KRT6AP02538 AC106739.1-201ENST00000617035 715 ntBASIC20.44■□□□□ 0.86
KRT6AP02538 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KRT6AP02538 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT6AP02538 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT6AP02538 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT6AP02538 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KRT6AP02538 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT6AP02538 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT6AP02538 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT6AP02538 EDA-201ENST00000338901 1233 ntBASIC20.43■□□□□ 0.86
KRT6AP02538 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT6AP02538 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT6AP02538 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KRT6AP02538 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT6AP02538 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
KRT6AP02538 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT6AP02538 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT6AP02538 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT6AP02538 AC009237.3-201ENST00000393279 1427 ntBASIC20.43■□□□□ 0.86
KRT6AP02538 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT6AP02538 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT6AP02538 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
KRT6AP02538 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT6AP02538 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
KRT6AP02538 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
KRT6AP02538 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KRT6AP02538 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.42■□□□□ 0.86
KRT6AP02538 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT6AP02538 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT6AP02538 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.42■□□□□ 0.86
KRT6AP02538 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT6AP02538 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT6AP02538 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KRT6AP02538 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT6AP02538 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT6AP02538 AC105233.4-201ENST00000642045 216 ntBASIC20.41■□□□□ 0.86
KRT6AP02538 TSPY26P-201ENST00000476365 1326 ntBASIC20.41■□□□□ 0.86
KRT6AP02538 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT6AP02538 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT6AP02538 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRT6AP02538 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT6AP02538 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT6AP02538 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
KRT6AP02538 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
KRT6AP02538 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.4■□□□□ 0.86
KRT6AP02538 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KRT6AP02538 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KRT6AP02538 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
KRT6AP02538 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT6AP02538 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT6AP02538 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KRT6AP02538 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT6AP02538 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT6AP02538 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT6AP02538 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.39■□□□□ 0.86
KRT6AP02538 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT6AP02538 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT6AP02538 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms