Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQA2P01906 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQA2P01906 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQA2P01906 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA2P01906 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 AF106564.1-201ENST00000607058 2553 ntBASIC18.92■□□□□ 0.62
HLA-DQA2P01906 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 MIR4767-201ENST00000582827 78 ntBASIC18.92■□□□□ 0.62
HLA-DQA2P01906 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA2P01906 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA2P01906 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 FEM1AP4-201ENST00000443167 1987 ntBASIC18.9■□□□□ 0.62
HLA-DQA2P01906 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 BX842568.3-201ENST00000418104 571 ntBASIC18.9■□□□□ 0.62
HLA-DQA2P01906 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 AC126544.1-201ENST00000580842 1059 ntBASIC18.9■□□□□ 0.62
HLA-DQA2P01906 AL136162.1-201ENST00000607711 1078 ntBASIC18.9■□□□□ 0.62
HLA-DQA2P01906 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA2P01906 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQA2P01906 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQA2P01906 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQA2P01906 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQA2P01906 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 AC008406.3-201ENST00000620001 1374 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms