Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PDGFBP01127 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.52■■□□□ 1.04
PDGFBP01127 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.52■■□□□ 1.04
PDGFBP01127 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PDGFBP01127 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PDGFBP01127 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDGFBP01127 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.52■■□□□ 1.04
PDGFBP01127 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDGFBP01127 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.52■■□□□ 1.03
PDGFBP01127 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDGFBP01127 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDGFBP01127 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDGFBP01127 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDGFBP01127 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDGFBP01127 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDGFBP01127 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.51■■□□□ 1.03
PDGFBP01127 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDGFBP01127 PNMA6B-201ENST00000538162 1200 ntBASIC21.51■■□□□ 1.03
PDGFBP01127 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.51■■□□□ 1.03
PDGFBP01127 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.51■■□□□ 1.03
PDGFBP01127 AL445228.2-201ENST00000605589 952 ntBASIC21.51■■□□□ 1.03
PDGFBP01127 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.51■■□□□ 1.03
PDGFBP01127 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDGFBP01127 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDGFBP01127 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.51■■□□□ 1.03
PDGFBP01127 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDGFBP01127 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDGFBP01127 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.5■■□□□ 1.03
PDGFBP01127 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.5■■□□□ 1.03
PDGFBP01127 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 RCN1P1-201ENST00000400413 996 ntBASIC21.5■■□□□ 1.03
PDGFBP01127 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.5■■□□□ 1.03
PDGFBP01127 TSPY15P-201ENST00000457163 923 ntBASIC21.5■■□□□ 1.03
PDGFBP01127 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.5■■□□□ 1.03
PDGFBP01127 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.5■■□□□ 1.03
PDGFBP01127 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.5■■□□□ 1.03
PDGFBP01127 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.5■■□□□ 1.03
PDGFBP01127 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.5■■□□□ 1.03
PDGFBP01127 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDGFBP01127 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.49■■□□□ 1.03
PDGFBP01127 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PDGFBP01127 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.49■■□□□ 1.03
PDGFBP01127 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.49■■□□□ 1.03
PDGFBP01127 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PDGFBP01127 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PDGFBP01127 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.49■■□□□ 1.03
PDGFBP01127 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PDGFBP01127 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.49■■□□□ 1.03
PDGFBP01127 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PDGFBP01127 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDGFBP01127 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.49■■□□□ 1.03
PDGFBP01127 AC004812.2-201ENST00000611079 2094 ntBASIC21.49■■□□□ 1.03
PDGFBP01127 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PDGFBP01127 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDGFBP01127 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 OR7E47P-201ENST00000546390 1422 ntBASIC21.48■■□□□ 1.03
PDGFBP01127 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDGFBP01127 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDGFBP01127 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.48■■□□□ 1.03
PDGFBP01127 AC069544.1-201ENST00000609399 999 ntBASIC21.48■■□□□ 1.03
PDGFBP01127 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.48■■□□□ 1.03
PDGFBP01127 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PDGFBP01127 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDGFBP01127 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDGFBP01127 AL139125.2-201ENST00000623134 1869 ntBASIC21.47■■□□□ 1.03
PDGFBP01127 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.47■■□□□ 1.03
PDGFBP01127 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDGFBP01127 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.47■■□□□ 1.03
PDGFBP01127 POU5F1P4-201ENST00000413175 1085 ntBASIC21.47■■□□□ 1.03
PDGFBP01127 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.47■■□□□ 1.03
PDGFBP01127 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDGFBP01127 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDGFBP01127 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.47■■□□□ 1.03
PDGFBP01127 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PDGFBP01127 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.47■■□□□ 1.03
PDGFBP01127 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PDGFBP01127 AC142381.3-201ENST00000568208 1670 ntBASIC21.47■■□□□ 1.03
PDGFBP01127 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDGFBP01127 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms