Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
CNOT4O95628 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT4O95628 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT4O95628 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.74■□□□□ 0.59
CNOT4O95628 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT4O95628 AC006015.1-201ENST00000429970 570 ntBASIC18.74■□□□□ 0.59
CNOT4O95628 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CNOT4O95628 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNOT4O95628 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT4O95628 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT4O95628 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CNOT4O95628 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CNOT4O95628 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT4O95628 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT4O95628 KRT18P20-201ENST00000548986 1279 ntBASIC18.73■□□□□ 0.59
CNOT4O95628 AC137761.2-201ENST00000561729 223 ntBASIC18.73■□□□□ 0.59
CNOT4O95628 AC145350.3-201ENST00000569033 163 ntBASIC18.73■□□□□ 0.59
CNOT4O95628 AC104187.1-201ENST00000607510 612 ntBASIC18.73■□□□□ 0.59
CNOT4O95628 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CNOT4O95628 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNOT4O95628 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT4O95628 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT4O95628 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT4O95628 AC016769.1-201ENST00000409132 1010 ntBASIC18.72■□□□□ 0.59
CNOT4O95628 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.72■□□□□ 0.59
CNOT4O95628 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT4O95628 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CNOT4O95628 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT4O95628 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CNOT4O95628 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT4O95628 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT4O95628 CLDN5-201ENST00000403084 2357 ntBASIC18.71■□□□□ 0.59
CNOT4O95628 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CNOT4O95628 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CNOT4O95628 AC010141.2-201ENST00000452426 721 ntBASIC18.71■□□□□ 0.59
CNOT4O95628 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT4O95628 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT4O95628 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.71■□□□□ 0.59
CNOT4O95628 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.71■□□□□ 0.59
CNOT4O95628 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CNOT4O95628 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT4O95628 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CNOT4O95628 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
CNOT4O95628 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CNOT4O95628 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CNOT4O95628 AC233723.2-201ENST00000623798 2106 ntBASIC18.7■□□□□ 0.58
CNOT4O95628 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT4O95628 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 AC080038.1-201ENST00000611274 1154 ntBASIC18.7■□□□□ 0.58
CNOT4O95628 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT4O95628 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT4O95628 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT4O95628 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms