Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-2O95096 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-2O95096 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.56■□□□□ 0.72
NKX2-2O95096 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.56■□□□□ 0.72
NKX2-2O95096 TERF1P2-201ENST00000583350 1212 ntBASIC19.56■□□□□ 0.72
NKX2-2O95096 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-2O95096 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 FEM1AP4-201ENST00000443167 1987 ntBASIC19.55■□□□□ 0.72
NKX2-2O95096 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.55■□□□□ 0.72
NKX2-2O95096 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-2O95096 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.55■□□□□ 0.72
NKX2-2O95096 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-2O95096 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.55■□□□□ 0.72
NKX2-2O95096 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-2O95096 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-2O95096 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-2O95096 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 KRT87P-202ENST00000534226 1464 ntBASIC19.54■□□□□ 0.72
NKX2-2O95096 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX2-2O95096 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NKX2-2O95096 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NKX2-2O95096 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.54■□□□□ 0.72
NKX2-2O95096 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX2-2O95096 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-2O95096 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.54■□□□□ 0.72
NKX2-2O95096 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-2O95096 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-2O95096 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-2O95096 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.53■□□□□ 0.72
NKX2-2O95096 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.53■□□□□ 0.72
NKX2-2O95096 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-2O95096 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-2O95096 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NKX2-2O95096 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.52■□□□□ 0.72
NKX2-2O95096 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-2O95096 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NKX2-2O95096 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.52■□□□□ 0.72
NKX2-2O95096 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX2-2O95096 CCDC92B-201ENST00000575506 885 ntBASIC19.52■□□□□ 0.72
NKX2-2O95096 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-2O95096 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-2O95096 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-2O95096 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NKX2-2O95096 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.52■□□□□ 0.71
NKX2-2O95096 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NKX2-2O95096 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-2O95096 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-2O95096 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-2O95096 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-2O95096 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-2O95096 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NKX2-2O95096 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.51■□□□□ 0.71
NKX2-2O95096 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.51■□□□□ 0.71
NKX2-2O95096 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-2O95096 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-2O95096 AL024507.2-201ENST00000606070 2574 ntBASIC19.51■□□□□ 0.71
NKX2-2O95096 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-2O95096 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-2O95096 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-2O95096 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms