Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
ALX3O95076 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.6■□□□□ 0.57
ALX3O95076 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.6■□□□□ 0.57
ALX3O95076 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.6■□□□□ 0.57
ALX3O95076 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.6■□□□□ 0.57
ALX3O95076 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.6■□□□□ 0.57
ALX3O95076 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.6■□□□□ 0.57
ALX3O95076 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
ALX3O95076 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX3O95076 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ALX3O95076 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.59■□□□□ 0.57
ALX3O95076 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.59■□□□□ 0.57
ALX3O95076 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
ALX3O95076 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.59■□□□□ 0.57
ALX3O95076 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ALX3O95076 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ALX3O95076 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
ALX3O95076 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.59■□□□□ 0.57
ALX3O95076 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX3O95076 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.59■□□□□ 0.57
ALX3O95076 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
ALX3O95076 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX3O95076 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX3O95076 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX3O95076 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ALX3O95076 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.58■□□□□ 0.57
ALX3O95076 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX3O95076 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.58■□□□□ 0.57
ALX3O95076 KRT16P3-201ENST00000439127 1283 ntBASIC18.58■□□□□ 0.56
ALX3O95076 AL356441.2-201ENST00000443009 864 ntBASIC18.58■□□□□ 0.56
ALX3O95076 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.58■□□□□ 0.56
ALX3O95076 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.58■□□□□ 0.56
ALX3O95076 AL356740.2-201ENST00000601559 647 ntBASIC18.58■□□□□ 0.56
ALX3O95076 pRNA.6-201ENST00000610482 90 ntBASIC18.58■□□□□ 0.56
ALX3O95076 pRNA.5-201ENST00000612139 90 ntBASIC18.58■□□□□ 0.56
ALX3O95076 pRNA.11-201ENST00000618423 90 ntBASIC18.58■□□□□ 0.56
ALX3O95076 pRNA.13-201ENST00000619112 90 ntBASIC18.58■□□□□ 0.56
ALX3O95076 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALX3O95076 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
ALX3O95076 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ALX3O95076 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALX3O95076 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALX3O95076 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALX3O95076 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.57■□□□□ 0.56
ALX3O95076 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.57■□□□□ 0.56
ALX3O95076 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ALX3O95076 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX3O95076 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.56■□□□□ 0.56
ALX3O95076 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.56■□□□□ 0.56
ALX3O95076 OR2I1P-207ENST00000453522 948 ntBASIC18.56■□□□□ 0.56
ALX3O95076 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.56■□□□□ 0.56
ALX3O95076 MIR3621-201ENST00000580529 85 ntBASIC18.56■□□□□ 0.56
ALX3O95076 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.56■□□□□ 0.56
ALX3O95076 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.56■□□□□ 0.56
ALX3O95076 AC092171.4-201ENST00000609130 632 ntBASIC18.56■□□□□ 0.56
ALX3O95076 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ALX3O95076 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.56■□□□□ 0.56
ALX3O95076 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.56■□□□□ 0.56
ALX3O95076 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX3O95076 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms