Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD1O75127 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD1O75127 RHEB-204ENST00000472642 900 ntTSL 3 BASIC27.29■■□□□ 1.96
PTCD1O75127 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
PTCD1O75127 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.29■■□□□ 1.96
PTCD1O75127 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.29■■□□□ 1.96
PTCD1O75127 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.29■■□□□ 1.96
PTCD1O75127 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.29■■□□□ 1.96
PTCD1O75127 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.29■■□□□ 1.96
PTCD1O75127 AC010980.2-201ENST00000587099 1412 ntBASIC27.29■■□□□ 1.96
PTCD1O75127 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.29■■□□□ 1.96
PTCD1O75127 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD1O75127 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PTCD1O75127 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD1O75127 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD1O75127 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 KRT16P2-201ENST00000414673 1423 ntBASIC27.28■■□□□ 1.96
PTCD1O75127 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 AC097658.1-201ENST00000475555 843 ntBASIC27.28■■□□□ 1.96
PTCD1O75127 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
PTCD1O75127 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.28■■□□□ 1.96
PTCD1O75127 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.28■■□□□ 1.96
PTCD1O75127 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCD1O75127 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD1O75127 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.27■■□□□ 1.96
PTCD1O75127 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD1O75127 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD1O75127 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD1O75127 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC27.27■■□□□ 1.96
PTCD1O75127 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.27■■□□□ 1.96
PTCD1O75127 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD1O75127 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
PTCD1O75127 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.27■■□□□ 1.96
PTCD1O75127 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.27■■□□□ 1.96
PTCD1O75127 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD1O75127 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
PTCD1O75127 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
PTCD1O75127 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD1O75127 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
PTCD1O75127 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD1O75127 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD1O75127 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD1O75127 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.26■■□□□ 1.95
PTCD1O75127 RPS2P52-201ENST00000469610 820 ntBASIC27.26■■□□□ 1.95
PTCD1O75127 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.26■■□□□ 1.95
PTCD1O75127 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.26■■□□□ 1.95
PTCD1O75127 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCD1O75127 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.25■■□□□ 1.95
PTCD1O75127 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 ESRRAP1-201ENST00000400596 1257 ntBASIC27.25■■□□□ 1.95
PTCD1O75127 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27.25■■□□□ 1.95
PTCD1O75127 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC27.25■■□□□ 1.95
PTCD1O75127 AC091874.3-201ENST00000512672 1195 ntBASIC27.25■■□□□ 1.95
PTCD1O75127 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.25■■□□□ 1.95
PTCD1O75127 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.25■■□□□ 1.95
PTCD1O75127 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.25■■□□□ 1.95
PTCD1O75127 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD1O75127 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
PTCD1O75127 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 DUSP5P2-201ENST00000426873 1033 ntBASIC27.24■■□□□ 1.95
PTCD1O75127 AC098590.1-201ENST00000468126 897 ntBASIC27.24■■□□□ 1.95
PTCD1O75127 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.24■■□□□ 1.95
PTCD1O75127 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.24■■□□□ 1.95
PTCD1O75127 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27.24■■□□□ 1.95
PTCD1O75127 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.24■■□□□ 1.95
PTCD1O75127 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 AC003102.1-202ENST00000563394 1796 ntBASIC27.24■■□□□ 1.95
PTCD1O75127 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD1O75127 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.24■■□□□ 1.95
PTCD1O75127 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.24■■□□□ 1.95
PTCD1O75127 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
PTCD1O75127 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
PTCD1O75127 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.23■■□□□ 1.95
PTCD1O75127 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC27.23■■□□□ 1.95
PTCD1O75127 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC27.23■■□□□ 1.95
PTCD1O75127 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD1O75127 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
PTCD1O75127 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PTCD1O75127 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PTCD1O75127 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PTCD1O75127 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms