Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 AL117332.1-201ENST00000622628 974 ntBASIC15.79■□□□□ 0.12
SH2D1AO60880 AC241377.3-202ENST00000626088 1088 ntBASIC15.79■□□□□ 0.12
SH2D1AO60880 AC241585.3-202ENST00000628937 1088 ntBASIC15.79■□□□□ 0.12
SH2D1AO60880 AC245100.8-202ENST00000629247 1058 ntBASIC15.79■□□□□ 0.12
SH2D1AO60880 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.79■□□□□ 0.12
SH2D1AO60880 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SH2D1AO60880 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH2D1AO60880 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH2D1AO60880 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SH2D1AO60880 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH2D1AO60880 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH2D1AO60880 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH2D1AO60880 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.79■□□□□ 0.12
SH2D1AO60880 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SH2D1AO60880 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SH2D1AO60880 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SH2D1AO60880 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.78■□□□□ 0.12
SH2D1AO60880 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SH2D1AO60880 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SH2D1AO60880 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 Z92544.1-202ENST00000571933 1220 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 pRNA.6-201ENST00000610482 90 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 pRNA.5-201ENST00000612139 90 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 pRNA.11-201ENST00000618423 90 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 pRNA.13-201ENST00000619112 90 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 AC087239.1-201ENST00000622671 572 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 AC068587.7-201ENST00000641602 218 ntBASIC15.78■□□□□ 0.12
SH2D1AO60880 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.78■□□□□ 0.12
SH2D1AO60880 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH2D1AO60880 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH2D1AO60880 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH2D1AO60880 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SH2D1AO60880 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH2D1AO60880 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH2D1AO60880 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.77■□□□□ 0.12
SH2D1AO60880 MIR4787-201ENST00000607364 84 ntBASIC15.77■□□□□ 0.12
SH2D1AO60880 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SH2D1AO60880 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
SH2D1AO60880 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SH2D1AO60880 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.77■□□□□ 0.11
SH2D1AO60880 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SH2D1AO60880 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SH2D1AO60880 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SH2D1AO60880 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.76■□□□□ 0.11
SH2D1AO60880 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SH2D1AO60880 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.76■□□□□ 0.11
SH2D1AO60880 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 TSPY9P-201ENST00000440215 945 ntBASIC15.76■□□□□ 0.11
SH2D1AO60880 TSPY11P-201ENST00000442607 1045 ntBASIC15.76■□□□□ 0.11
SH2D1AO60880 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SH2D1AO60880 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SH2D1AO60880 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.76■□□□□ 0.11
SH2D1AO60880 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SH2D1AO60880 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.76■□□□□ 0.11
SH2D1AO60880 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
SH2D1AO60880 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.76■□□□□ 0.11
SH2D1AO60880 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH2D1AO60880 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.75■□□□□ 0.11
SH2D1AO60880 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.75■□□□□ 0.11
SH2D1AO60880 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 AC006455.2-201ENST00000429931 906 ntBASIC15.75■□□□□ 0.11
SH2D1AO60880 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.75■□□□□ 0.11
SH2D1AO60880 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH2D1AO60880 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SH2D1AO60880 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
SH2D1AO60880 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms