Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.89■□□□□ 0.94
KLHL41O60662 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
KLHL41O60662 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.89■□□□□ 0.94
KLHL41O60662 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHL41O60662 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
KLHL41O60662 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
KLHL41O60662 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHL41O60662 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHL41O60662 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHL41O60662 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.89■□□□□ 0.93
KLHL41O60662 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHL41O60662 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHL41O60662 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHL41O60662 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KLHL41O60662 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.89■□□□□ 0.93
KLHL41O60662 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHL41O60662 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
KLHL41O60662 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.88■□□□□ 0.93
KLHL41O60662 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.88■□□□□ 0.93
KLHL41O60662 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHL41O60662 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHL41O60662 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KLHL41O60662 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHL41O60662 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KLHL41O60662 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.87■□□□□ 0.93
KLHL41O60662 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.87■□□□□ 0.93
KLHL41O60662 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.87■□□□□ 0.93
KLHL41O60662 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KLHL41O60662 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.87■□□□□ 0.93
KLHL41O60662 MIR3181-201ENST00000578512 73 ntBASIC20.87■□□□□ 0.93
KLHL41O60662 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHL41O60662 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KLHL41O60662 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.86■□□□□ 0.93
KLHL41O60662 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHL41O60662 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.86■□□□□ 0.93
KLHL41O60662 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.86■□□□□ 0.93
KLHL41O60662 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.86■□□□□ 0.93
KLHL41O60662 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KLHL41O60662 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHL41O60662 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.85■□□□□ 0.93
KLHL41O60662 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KLHL41O60662 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.85■□□□□ 0.93
KLHL41O60662 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.85■□□□□ 0.93
KLHL41O60662 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.85■□□□□ 0.93
KLHL41O60662 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.85■□□□□ 0.93
KLHL41O60662 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
KLHL41O60662 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHL41O60662 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KLHL41O60662 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KLHL41O60662 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
KLHL41O60662 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
KLHL41O60662 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.84■□□□□ 0.93
KLHL41O60662 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
KLHL41O60662 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
KLHL41O60662 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.84■□□□□ 0.93
KLHL41O60662 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.84■□□□□ 0.93
KLHL41O60662 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KLHL41O60662 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHL41O60662 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHL41O60662 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHL41O60662 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHL41O60662 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHL41O60662 LINC01521-201ENST00000504184 1943 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms