Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.99■□□□□ 0.79
URB1O60287 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.99■□□□□ 0.79
URB1O60287 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.99■□□□□ 0.79
URB1O60287 AC008403.3-201ENST00000598924 454 ntBASIC19.99■□□□□ 0.79
URB1O60287 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
URB1O60287 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.99■□□□□ 0.79
URB1O60287 AC012618.2-201ENST00000428058 849 ntBASIC19.99■□□□□ 0.79
URB1O60287 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.99■□□□□ 0.79
URB1O60287 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
URB1O60287 DUSP8P3-201ENST00000399571 1760 ntBASIC19.98■□□□□ 0.79
URB1O60287 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
URB1O60287 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
URB1O60287 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
URB1O60287 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
URB1O60287 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
URB1O60287 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.98■□□□□ 0.79
URB1O60287 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.98■□□□□ 0.79
URB1O60287 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.98■□□□□ 0.79
URB1O60287 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.98■□□□□ 0.79
URB1O60287 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.98■□□□□ 0.79
URB1O60287 C1QBPP2-201ENST00000528754 825 ntBASIC19.98■□□□□ 0.79
URB1O60287 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
URB1O60287 AL445228.2-201ENST00000605589 952 ntBASIC19.98■□□□□ 0.79
URB1O60287 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.98■□□□□ 0.79
URB1O60287 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.98■□□□□ 0.79
URB1O60287 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.98■□□□□ 0.79
URB1O60287 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.97■□□□□ 0.79
URB1O60287 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
URB1O60287 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.97■□□□□ 0.79
URB1O60287 BX088651.1-201ENST00000540551 451 ntBASIC19.97■□□□□ 0.79
URB1O60287 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.97■□□□□ 0.79
URB1O60287 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.97■□□□□ 0.79
URB1O60287 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.97■□□□□ 0.79
URB1O60287 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
URB1O60287 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.97■□□□□ 0.79
URB1O60287 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
URB1O60287 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
URB1O60287 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
URB1O60287 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 EEF1DP3-203ENST00000566025 782 ntBASIC19.96■□□□□ 0.79
URB1O60287 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.96■□□□□ 0.79
URB1O60287 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
URB1O60287 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
URB1O60287 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.96■□□□□ 0.79
URB1O60287 CYP2T3P-201ENST00000601990 817 ntBASIC19.96■□□□□ 0.79
URB1O60287 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.96■□□□□ 0.79
URB1O60287 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.96■□□□□ 0.79
URB1O60287 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
URB1O60287 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
URB1O60287 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.95■□□□□ 0.78
URB1O60287 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.95■□□□□ 0.78
URB1O60287 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.95■□□□□ 0.78
URB1O60287 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.95■□□□□ 0.78
URB1O60287 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
URB1O60287 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
URB1O60287 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
URB1O60287 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.95■□□□□ 0.78
URB1O60287 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.95■□□□□ 0.78
URB1O60287 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.95■□□□□ 0.78
URB1O60287 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
URB1O60287 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.94■□□□□ 0.78
URB1O60287 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
URB1O60287 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
URB1O60287 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
URB1O60287 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.94■□□□□ 0.78
URB1O60287 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
URB1O60287 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.94■□□□□ 0.78
URB1O60287 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.93■□□□□ 0.78
URB1O60287 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.93■□□□□ 0.78
URB1O60287 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
URB1O60287 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms