Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH7O60245 AL024507.2-201ENST00000606070 2574 ntBASIC20.19■□□□□ 0.82
PCDH7O60245 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH7O60245 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH7O60245 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH7O60245 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH7O60245 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
PCDH7O60245 BX005040.4-201ENST00000637145 1518 ntBASIC20.18■□□□□ 0.82
PCDH7O60245 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH7O60245 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDH7O60245 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH7O60245 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
PCDH7O60245 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
PCDH7O60245 AC005224.4-201ENST00000583262 1652 ntBASIC20.17■□□□□ 0.82
PCDH7O60245 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDH7O60245 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH7O60245 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH7O60245 AC142381.2-201ENST00000566120 298 ntBASIC20.17■□□□□ 0.82
PCDH7O60245 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH7O60245 AC055733.4-201ENST00000638462 1354 ntBASIC20.17■□□□□ 0.82
PCDH7O60245 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH7O60245 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH7O60245 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH7O60245 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH7O60245 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH7O60245 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH7O60245 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDH7O60245 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH7O60245 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH7O60245 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH7O60245 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCDH7O60245 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH7O60245 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH7O60245 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH7O60245 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDH7O60245 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH7O60245 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH7O60245 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH7O60245 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH7O60245 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.15■□□□□ 0.82
PCDH7O60245 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH7O60245 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH7O60245 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDH7O60245 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDH7O60245 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH7O60245 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDH7O60245 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH7O60245 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH7O60245 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCDH7O60245 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCDH7O60245 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH7O60245 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH7O60245 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH7O60245 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDH7O60245 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCDH7O60245 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDH7O60245 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH7O60245 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH7O60245 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms