Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.53■■□□□ 1.04
KDELR3O43731 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.53■■□□□ 1.04
KDELR3O43731 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KDELR3O43731 KRT18P20-201ENST00000548986 1279 ntBASIC21.53■■□□□ 1.04
KDELR3O43731 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.53■■□□□ 1.04
KDELR3O43731 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.53■■□□□ 1.04
KDELR3O43731 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.53■■□□□ 1.04
KDELR3O43731 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.53■■□□□ 1.04
KDELR3O43731 IKBKGP1-201ENST00000612193 1073 ntBASIC21.53■■□□□ 1.04
KDELR3O43731 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KDELR3O43731 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.53■■□□□ 1.04
KDELR3O43731 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDELR3O43731 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDELR3O43731 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.52■■□□□ 1.04
KDELR3O43731 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.52■■□□□ 1.04
KDELR3O43731 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.52■■□□□ 1.04
KDELR3O43731 AC006015.1-201ENST00000429970 570 ntBASIC21.52■■□□□ 1.04
KDELR3O43731 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 AC008175.2-201ENST00000612840 297 ntBASIC21.52■■□□□ 1.04
KDELR3O43731 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.52■■□□□ 1.04
KDELR3O43731 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KDELR3O43731 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KDELR3O43731 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
KDELR3O43731 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.51■■□□□ 1.03
KDELR3O43731 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
KDELR3O43731 FBXW4P1-201ENST00000426721 2239 ntBASIC21.51■■□□□ 1.03
KDELR3O43731 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 AC016769.1-201ENST00000409132 1010 ntBASIC21.51■■□□□ 1.03
KDELR3O43731 POU5F1P4-201ENST00000413175 1085 ntBASIC21.51■■□□□ 1.03
KDELR3O43731 AC092437.1-201ENST00000624794 1048 ntBASIC21.51■■□□□ 1.03
KDELR3O43731 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.51■■□□□ 1.03
KDELR3O43731 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KDELR3O43731 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
KDELR3O43731 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
KDELR3O43731 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDELR3O43731 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
KDELR3O43731 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDELR3O43731 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
KDELR3O43731 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KDELR3O43731 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.5■■□□□ 1.03
KDELR3O43731 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KDELR3O43731 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.5■■□□□ 1.03
KDELR3O43731 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.5■■□□□ 1.03
KDELR3O43731 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDELR3O43731 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.5■■□□□ 1.03
KDELR3O43731 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KDELR3O43731 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.5■■□□□ 1.03
KDELR3O43731 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDELR3O43731 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KDELR3O43731 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KDELR3O43731 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.49■■□□□ 1.03
KDELR3O43731 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.49■■□□□ 1.03
KDELR3O43731 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.49■■□□□ 1.03
KDELR3O43731 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.49■■□□□ 1.03
KDELR3O43731 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.49■■□□□ 1.03
KDELR3O43731 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 AC244015.2-201ENST00000616358 1861 ntBASIC21.49■■□□□ 1.03
KDELR3O43731 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDELR3O43731 AC061975.6-201ENST00000579045 1553 ntBASIC21.48■■□□□ 1.03
KDELR3O43731 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KDELR3O43731 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 KRT18P11-201ENST00000435214 1283 ntBASIC21.48■■□□□ 1.03
KDELR3O43731 SLC7A5P2-201ENST00000553010 536 ntBASIC21.48■■□□□ 1.03
KDELR3O43731 UBE2DNL-204ENST00000602536 740 ntBASIC21.48■■□□□ 1.03
KDELR3O43731 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.48■■□□□ 1.03
KDELR3O43731 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.48■■□□□ 1.03
KDELR3O43731 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.48■■□□□ 1.03
KDELR3O43731 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KDELR3O43731 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.48■■□□□ 1.03
KDELR3O43731 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.48■■□□□ 1.03
KDELR3O43731 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDELR3O43731 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KDELR3O43731 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms