Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM1O43490 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM1O43490 YBX1P1-201ENST00000445822 960 ntBASIC20.06■□□□□ 0.8
PROM1O43490 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM1O43490 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM1O43490 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.06■□□□□ 0.8
PROM1O43490 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.06■□□□□ 0.8
PROM1O43490 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM1O43490 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.06■□□□□ 0.8
PROM1O43490 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM1O43490 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.06■□□□□ 0.8
PROM1O43490 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.06■□□□□ 0.8
PROM1O43490 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM1O43490 LINC02228-203ENST00000641970 1355 ntBASIC20.06■□□□□ 0.8
PROM1O43490 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM1O43490 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.06■□□□□ 0.8
PROM1O43490 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM1O43490 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
PROM1O43490 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM1O43490 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PROM1O43490 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PROM1O43490 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM1O43490 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PROM1O43490 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM1O43490 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PROM1O43490 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM1O43490 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PROM1O43490 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PROM1O43490 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.04■□□□□ 0.8
PROM1O43490 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.04■□□□□ 0.8
PROM1O43490 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PROM1O43490 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM1O43490 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.04■□□□□ 0.8
PROM1O43490 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.03■□□□□ 0.8
PROM1O43490 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.03■□□□□ 0.8
PROM1O43490 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PROM1O43490 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
PROM1O43490 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.03■□□□□ 0.8
PROM1O43490 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.03■□□□□ 0.8
PROM1O43490 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.03■□□□□ 0.8
PROM1O43490 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.03■□□□□ 0.8
PROM1O43490 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PROM1O43490 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PROM1O43490 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM1O43490 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PROM1O43490 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.03■□□□□ 0.8
PROM1O43490 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM1O43490 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.02■□□□□ 0.8
PROM1O43490 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.02■□□□□ 0.8
PROM1O43490 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PROM1O43490 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.02■□□□□ 0.8
PROM1O43490 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM1O43490 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.02■□□□□ 0.8
PROM1O43490 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.02■□□□□ 0.8
PROM1O43490 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PROM1O43490 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PROM1O43490 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.02■□□□□ 0.79
PROM1O43490 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PROM1O43490 AC007375.3-201ENST00000600936 2314 ntBASIC20.01■□□□□ 0.79
PROM1O43490 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PROM1O43490 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PROM1O43490 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.01■□□□□ 0.79
PROM1O43490 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.01■□□□□ 0.79
PROM1O43490 TERF1P2-201ENST00000583350 1212 ntBASIC20.01■□□□□ 0.79
PROM1O43490 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PROM1O43490 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PROM1O43490 Z98882.1-201ENST00000622160 2253 ntBASIC20.01■□□□□ 0.79
PROM1O43490 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.01■□□□□ 0.79
PROM1O43490 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.01■□□□□ 0.79
PROM1O43490 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PROM1O43490 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.01■□□□□ 0.79
PROM1O43490 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.01■□□□□ 0.79
PROM1O43490 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PROM1O43490 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20■□□□□ 0.79
PROM1O43490 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms