Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.64■□□□□ 0.73
NKX2-8O15522 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.64■□□□□ 0.73
NKX2-8O15522 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-8O15522 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-8O15522 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX2-8O15522 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.63■□□□□ 0.73
NKX2-8O15522 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-8O15522 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NKX2-8O15522 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.63■□□□□ 0.73
NKX2-8O15522 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.63■□□□□ 0.73
NKX2-8O15522 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-8O15522 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-8O15522 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-8O15522 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-8O15522 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NKX2-8O15522 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-8O15522 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-8O15522 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-8O15522 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-8O15522 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-8O15522 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-8O15522 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-8O15522 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-8O15522 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-8O15522 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-8O15522 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-8O15522 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-8O15522 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-8O15522 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
NKX2-8O15522 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-8O15522 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-8O15522 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NKX2-8O15522 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.61■□□□□ 0.73
NKX2-8O15522 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-8O15522 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-8O15522 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-8O15522 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-8O15522 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-8O15522 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NKX2-8O15522 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-8O15522 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-8O15522 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-8O15522 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-8O15522 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKX2-8O15522 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-8O15522 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-8O15522 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-8O15522 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-8O15522 LSM12P1-201ENST00000411836 588 ntBASIC19.6■□□□□ 0.73
NKX2-8O15522 AL596275.1-201ENST00000423464 877 ntBASIC19.6■□□□□ 0.73
NKX2-8O15522 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-8O15522 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NKX2-8O15522 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.6■□□□□ 0.73
NKX2-8O15522 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.6■□□□□ 0.73
NKX2-8O15522 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-8O15522 AC243732.1-201ENST00000612648 864 ntBASIC19.6■□□□□ 0.73
NKX2-8O15522 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-8O15522 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX2-8O15522 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NKX2-8O15522 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-8O15522 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NKX2-8O15522 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 AC139530.1-201ENST00000575312 1977 ntBASIC19.59■□□□□ 0.73
NKX2-8O15522 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NKX2-8O15522 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.59■□□□□ 0.73
NKX2-8O15522 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.59■□□□□ 0.73
NKX2-8O15522 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-8O15522 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.58■□□□□ 0.73
NKX2-8O15522 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-8O15522 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-8O15522 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-8O15522 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.58■□□□□ 0.72
NKX2-8O15522 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-8O15522 RPS2P4-201ENST00000476944 856 ntBASIC19.58■□□□□ 0.72
NKX2-8O15522 AC026366.1-201ENST00000488803 879 ntBASIC19.58■□□□□ 0.72
NKX2-8O15522 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-8O15522 UNC93B5-201ENST00000530315 699 ntBASIC19.58■□□□□ 0.72
NKX2-8O15522 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-8O15522 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-8O15522 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.58■□□□□ 0.72
NKX2-8O15522 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-8O15522 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-8O15522 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-8O15522 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-8O15522 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.57■□□□□ 0.72
NKX2-8O15522 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NKX2-8O15522 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-8O15522 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-8O15522 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms