Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFSF11O14788 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFSF11O14788 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFSF11O14788 AP001160.3-201ENST00000601484 763 ntBASIC19.01■□□□□ 0.63
TNFSF11O14788 IKBKGP1-201ENST00000612193 1073 ntBASIC19.01■□□□□ 0.63
TNFSF11O14788 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TNFSF11O14788 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF11O14788 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF11O14788 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF11O14788 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF11O14788 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TNFSF11O14788 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFSF11O14788 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF11O14788 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19■□□□□ 0.63
TNFSF11O14788 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TNFSF11O14788 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19■□□□□ 0.63
TNFSF11O14788 AC138907.5-202ENST00000569484 235 ntBASIC19■□□□□ 0.63
TNFSF11O14788 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19■□□□□ 0.63
TNFSF11O14788 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19■□□□□ 0.63
TNFSF11O14788 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TNFSF11O14788 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFSF11O14788 FBXW4P1-201ENST00000426721 2239 ntBASIC19■□□□□ 0.63
TNFSF11O14788 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TNFSF11O14788 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFSF11O14788 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF11O14788 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFSF11O14788 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TNFSF11O14788 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF11O14788 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF11O14788 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFSF11O14788 AC016769.1-201ENST00000409132 1010 ntBASIC18.99■□□□□ 0.63
TNFSF11O14788 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF11O14788 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF11O14788 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF11O14788 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF11O14788 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF11O14788 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.98■□□□□ 0.63
TNFSF11O14788 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TNFSF11O14788 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFSF11O14788 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFSF11O14788 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFSF11O14788 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFSF11O14788 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.98■□□□□ 0.63
TNFSF11O14788 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TNFSF11O14788 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFSF11O14788 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TNFSF11O14788 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TNFSF11O14788 AC010141.2-201ENST00000452426 721 ntBASIC18.97■□□□□ 0.63
TNFSF11O14788 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFSF11O14788 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFSF11O14788 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF11O14788 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF11O14788 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF11O14788 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.96■□□□□ 0.63
TNFSF11O14788 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF11O14788 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.96■□□□□ 0.63
TNFSF11O14788 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.96■□□□□ 0.63
TNFSF11O14788 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TNFSF11O14788 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF11O14788 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFSF11O14788 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFSF11O14788 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TNFSF11O14788 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFSF11O14788 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TNFSF11O14788 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFSF11O14788 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFSF11O14788 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFSF11O14788 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF11O14788 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.95■□□□□ 0.62
TNFSF11O14788 AL137784.2-201ENST00000607332 1000 ntBASIC18.95■□□□□ 0.62
TNFSF11O14788 AC092437.1-201ENST00000624794 1048 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms