Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC34.86■■■■□ 3.17
CHD1O14646 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CHD1O14646 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CHD1O14646 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CHD1O14646 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC34.86■■■■□ 3.17
CHD1O14646 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC34.86■■■■□ 3.17
CHD1O14646 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC34.86■■■■□ 3.17
CHD1O14646 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC34.86■■■■□ 3.17
CHD1O14646 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC34.86■■■■□ 3.17
CHD1O14646 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CHD1O14646 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
CHD1O14646 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC34.85■■■■□ 3.17
CHD1O14646 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
CHD1O14646 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
CHD1O14646 POM121L13P-201ENST00000422362 380 ntBASIC34.85■■■■□ 3.17
CHD1O14646 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC34.85■■■■□ 3.17
CHD1O14646 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
CHD1O14646 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC34.85■■■■□ 3.17
CHD1O14646 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
CHD1O14646 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC34.84■■■■□ 3.17
CHD1O14646 CD177P1-201ENST00000606252 935 ntBASIC34.84■■■■□ 3.17
CHD1O14646 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
CHD1O14646 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC34.84■■■■□ 3.17
CHD1O14646 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC34.84■■■■□ 3.17
CHD1O14646 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CHD1O14646 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHD1O14646 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC34.83■■■■□ 3.17
CHD1O14646 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHD1O14646 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHD1O14646 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHD1O14646 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC34.83■■■■□ 3.17
CHD1O14646 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC34.83■■■■□ 3.17
CHD1O14646 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC34.83■■■■□ 3.17
CHD1O14646 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHD1O14646 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CHD1O14646 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CHD1O14646 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CHD1O14646 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
CHD1O14646 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
CHD1O14646 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CHD1O14646 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.82■■■■□ 3.16
CHD1O14646 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
CHD1O14646 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 POU5F1P4-201ENST00000413175 1085 ntBASIC34.81■■■■□ 3.16
CHD1O14646 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC34.81■■■■□ 3.16
CHD1O14646 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC34.81■■■■□ 3.16
CHD1O14646 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CHD1O14646 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC34.8■■■■□ 3.16
CHD1O14646 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC34.8■■■■□ 3.16
CHD1O14646 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CHD1O14646 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CHD1O14646 MIR4785-201ENST00000585005 73 ntBASIC34.8■■■■□ 3.16
CHD1O14646 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
CHD1O14646 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC34.8■■■■□ 3.16
CHD1O14646 KRT17P2-201ENST00000300992 1314 ntBASIC34.79■■■■□ 3.16
CHD1O14646 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CHD1O14646 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CHD1O14646 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CHD1O14646 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC34.79■■■■□ 3.16
CHD1O14646 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC34.79■■■■□ 3.16
CHD1O14646 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC34.79■■■■□ 3.16
CHD1O14646 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CHD1O14646 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CHD1O14646 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CHD1O14646 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 AC113410.3-201ENST00000623366 203 ntBASIC34.78■■■■□ 3.16
CHD1O14646 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC34.78■■■■□ 3.16
CHD1O14646 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC34.78■■■■□ 3.16
CHD1O14646 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC34.78■■■■□ 3.16
CHD1O14646 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC34.78■■■■□ 3.16
CHD1O14646 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC34.78■■■■□ 3.16
CHD1O14646 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHD1O14646 LINC01960-201ENST00000563759 1884 ntBASIC34.78■■■■□ 3.16
CHD1O14646 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC34.77■■■■□ 3.16
CHD1O14646 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CHD1O14646 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC34.77■■■■□ 3.16
CHD1O14646 OR2A1-AS1-207ENST00000486094 819 ntBASIC34.77■■■■□ 3.16
CHD1O14646 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC34.77■■■■□ 3.16
CHD1O14646 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC34.77■■■■□ 3.16
CHD1O14646 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC34.77■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms