Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLDN4O14493 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN4O14493 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CLDN4O14493 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN4O14493 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN4O14493 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN4O14493 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN4O14493 AC079834.2-201ENST00000609776 1949 ntBASIC19.92■□□□□ 0.78
CLDN4O14493 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN4O14493 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN4O14493 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN4O14493 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CLDN4O14493 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLDN4O14493 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN4O14493 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN4O14493 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLDN4O14493 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN4O14493 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN4O14493 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN4O14493 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN4O14493 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN4O14493 AC104187.1-201ENST00000607510 612 ntBASIC19.91■□□□□ 0.78
CLDN4O14493 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN4O14493 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN4O14493 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN4O14493 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN4O14493 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN4O14493 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 AC138907.5-202ENST00000569484 235 ntBASIC19.9■□□□□ 0.78
CLDN4O14493 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN4O14493 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLDN4O14493 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN4O14493 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN4O14493 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLDN4O14493 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN4O14493 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CLDN4O14493 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN4O14493 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN4O14493 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLDN4O14493 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CLDN4O14493 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN4O14493 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLDN4O14493 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN4O14493 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN4O14493 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLDN4O14493 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN4O14493 AC008175.2-201ENST00000612840 297 ntBASIC19.89■□□□□ 0.77
CLDN4O14493 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CLDN4O14493 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CLDN4O14493 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN4O14493 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN4O14493 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN4O14493 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN4O14493 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN4O14493 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN4O14493 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN4O14493 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN4O14493 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN4O14493 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN4O14493 AP001160.3-201ENST00000601484 763 ntBASIC19.87■□□□□ 0.77
CLDN4O14493 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CLDN4O14493 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN4O14493 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN4O14493 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN4O14493 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN4O14493 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN4O14493 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms