Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLIC1O00299 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC1O00299 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.91■□□□□ 0.78
CLIC1O00299 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIC1O00299 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC1O00299 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC1O00299 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLIC1O00299 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIC1O00299 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
CLIC1O00299 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CLIC1O00299 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIC1O00299 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIC1O00299 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIC1O00299 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIC1O00299 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIC1O00299 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC1O00299 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIC1O00299 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLIC1O00299 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLIC1O00299 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIC1O00299 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLIC1O00299 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.89■□□□□ 0.77
CLIC1O00299 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
CLIC1O00299 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.89■□□□□ 0.77
CLIC1O00299 LINC01521-201ENST00000504184 1943 ntBASIC19.89■□□□□ 0.77
CLIC1O00299 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIC1O00299 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIC1O00299 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLIC1O00299 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC1O00299 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIC1O00299 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLIC1O00299 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLIC1O00299 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLIC1O00299 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIC1O00299 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIC1O00299 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIC1O00299 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIC1O00299 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC1O00299 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIC1O00299 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLIC1O00299 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.87■□□□□ 0.77
CLIC1O00299 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC1O00299 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC1O00299 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLIC1O00299 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLIC1O00299 SMUG1P1-201ENST00000590640 811 ntBASIC19.87■□□□□ 0.77
CLIC1O00299 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIC1O00299 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.87■□□□□ 0.77
CLIC1O00299 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC1O00299 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC1O00299 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC1O00299 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC1O00299 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC1O00299 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC1O00299 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms