Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.61■□□□□ 0.89
TAF4O00268 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.61■□□□□ 0.89
TAF4O00268 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TAF4O00268 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TAF4O00268 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TAF4O00268 ESRRAP1-201ENST00000400596 1257 ntBASIC20.61■□□□□ 0.89
TAF4O00268 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.61■□□□□ 0.89
TAF4O00268 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TAF4O00268 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TAF4O00268 MYCNOS-205ENST00000641950 531 ntBASIC20.61■□□□□ 0.89
TAF4O00268 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TAF4O00268 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.61■□□□□ 0.89
TAF4O00268 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TAF4O00268 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TAF4O00268 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TAF4O00268 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TAF4O00268 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TAF4O00268 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 MIPEPP3-201ENST00000412105 444 ntBASIC20.6■□□□□ 0.89
TAF4O00268 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.6■□□□□ 0.89
TAF4O00268 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.6■□□□□ 0.89
TAF4O00268 AC092118.2-201ENST00000613495 667 ntBASIC20.6■□□□□ 0.89
TAF4O00268 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.6■□□□□ 0.89
TAF4O00268 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TAF4O00268 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TAF4O00268 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TAF4O00268 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.59■□□□□ 0.89
TAF4O00268 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TAF4O00268 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.59■□□□□ 0.89
TAF4O00268 ECEL1P3-201ENST00000427961 737 ntBASIC20.59■□□□□ 0.89
TAF4O00268 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.59■□□□□ 0.89
TAF4O00268 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.59■□□□□ 0.89
TAF4O00268 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.59■□□□□ 0.89
TAF4O00268 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TAF4O00268 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.59■□□□□ 0.89
TAF4O00268 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.59■□□□□ 0.89
TAF4O00268 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.59■□□□□ 0.89
TAF4O00268 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TAF4O00268 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.59■□□□□ 0.89
TAF4O00268 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TAF4O00268 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.58■□□□□ 0.89
TAF4O00268 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.58■□□□□ 0.89
TAF4O00268 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.58■□□□□ 0.89
TAF4O00268 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TAF4O00268 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TAF4O00268 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TAF4O00268 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TAF4O00268 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TAF4O00268 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.58■□□□□ 0.88
TAF4O00268 AC007375.3-201ENST00000600936 2314 ntBASIC20.58■□□□□ 0.88
TAF4O00268 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TAF4O00268 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TAF4O00268 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.57■□□□□ 0.88
TAF4O00268 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.57■□□□□ 0.88
TAF4O00268 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.57■□□□□ 0.88
TAF4O00268 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TAF4O00268 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TAF4O00268 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.57■□□□□ 0.88
TAF4O00268 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TAF4O00268 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TAF4O00268 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
TAF4O00268 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TAF4O00268 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TAF4O00268 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TAF4O00268 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TAF4O00268 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.56■□□□□ 0.88
TAF4O00268 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TAF4O00268 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms