Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 FAM210CP-201ENST00000445714 574 ntBASIC20.77■□□□□ 0.92
C4orf47A7E2U8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
C4orf47A7E2U8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
C4orf47A7E2U8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
C4orf47A7E2U8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 AL591742.1-201ENST00000604433 565 ntBASIC20.76■□□□□ 0.91
C4orf47A7E2U8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C4orf47A7E2U8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.75■□□□□ 0.91
C4orf47A7E2U8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 MIR4497-201ENST00000583208 89 ntBASIC20.75■□□□□ 0.91
C4orf47A7E2U8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
C4orf47A7E2U8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C4orf47A7E2U8 AC008175.2-201ENST00000612840 297 ntBASIC20.74■□□□□ 0.91
C4orf47A7E2U8 FAM197Y4-202ENST00000622692 608 ntBASIC20.74■□□□□ 0.91
C4orf47A7E2U8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 LSM12P1-201ENST00000411836 588 ntBASIC20.73■□□□□ 0.91
C4orf47A7E2U8 AC211429.1-201ENST00000415277 523 ntBASIC20.73■□□□□ 0.91
C4orf47A7E2U8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 AL162412.1-201ENST00000567129 965 ntBASIC20.73■□□□□ 0.91
C4orf47A7E2U8 AC010331.1-201ENST00000611423 582 ntBASIC20.73■□□□□ 0.91
C4orf47A7E2U8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
C4orf47A7E2U8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 REXO1L12P-201ENST00000622156 912 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms