Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 CCDC92B-201ENST00000575506 885 ntBASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPDYE4A6NLX3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPDYE4A6NLX3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SPDYE4A6NLX3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPDYE4A6NLX3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPDYE4A6NLX3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SPDYE4A6NLX3 NTF6G-201ENST00000591094 616 ntBASIC23.58■■□□□ 1.37
SPDYE4A6NLX3 AC092053.2-201ENST00000640557 1818 ntBASIC23.58■■□□□ 1.37
SPDYE4A6NLX3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SPDYE4A6NLX3 AC139530.1-201ENST00000575312 1977 ntBASIC23.58■■□□□ 1.36
SPDYE4A6NLX3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 KRT18P14-201ENST00000534205 1250 ntBASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 AC010525.1-201ENST00000585559 441 ntBASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPDYE4A6NLX3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 LINC02228-203ENST00000641970 1355 ntBASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 AC092437.1-201ENST00000624794 1048 ntBASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPDYE4A6NLX3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPDYE4A6NLX3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms