Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 AL499627.2-201ENST00000606283 725 ntBASIC14.99□□□□□ -0.01
LINC01546A6NGU7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01546A6NGU7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 AC099778.1-201ENST00000568593 1911 ntBASIC14.98□□□□□ -0.01
LINC01546A6NGU7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01546A6NGU7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 AL512408.1-201ENST00000569378 2000 ntBASIC14.97□□□□□ -0.01
LINC01546A6NGU7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 MIR6722-201ENST00000617286 78 ntBASIC14.97□□□□□ -0.01
LINC01546A6NGU7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01546A6NGU7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 AC098818.2-201ENST00000564925 2320 ntBASIC14.96□□□□□ -0.01
LINC01546A6NGU7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 PCDHAC2-203ENST00000615316 3011 ntBASIC14.96□□□□□ -0.01
LINC01546A6NGU7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LINC01546A6NGU7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01546A6NGU7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC01546A6NGU7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01546A6NGU7 AC003102.1-202ENST00000563394 1796 ntBASIC14.96□□□□□ -0.02
LINC01546A6NGU7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01546A6NGU7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms