Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 AC073210.2-201ENST00000430369 194 ntBASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 MIR4758-201ENST00000577688 71 ntBASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 OR10C1-204ENST00000622521 1039 ntBASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 KRT16P2-201ENST00000414673 1423 ntBASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.53■■□□□ 1.04
TBC1D3BA6NDS4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 AC092053.2-201ENST00000640557 1818 ntBASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 AC003102.1-202ENST00000563394 1796 ntBASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3BA6NDS4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3BA6NDS4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 AC061975.6-201ENST00000579045 1553 ntBASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 MIPEPP3-201ENST00000412105 444 ntBASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 AC098934.4-201ENST00000564127 592 ntBASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 AC016405.3-201ENST00000607710 860 ntBASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TBC1D3BA6NDS4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 C1orf229-201ENST00000623686 2258 ntBASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3BA6NDS4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 AL512625.2-201ENST00000417533 625 ntBASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 AC093787.1-201ENST00000450396 207 ntBASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 AL591742.1-201ENST00000604433 565 ntBASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.48■■□□□ 1.03
TBC1D3BA6NDS4 RBM17P2-201ENST00000616397 1405 ntBASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3BA6NDS4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms