Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC196A0A1B0GTZ2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 Z98882.1-201ENST00000622160 2253 ntBASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC196A0A1B0GTZ2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC196A0A1B0GTZ2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CCDC196A0A1B0GTZ2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CCDC196A0A1B0GTZ2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
CCDC196A0A1B0GTZ2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CCDC196A0A1B0GTZ2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
CCDC196A0A1B0GTZ2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 AC034268.1-201ENST00000441047 882 ntBASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CCDC196A0A1B0GTZ2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC196A0A1B0GTZ2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms