Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC010525.1-201ENST00000585559 441 ntBASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC087239.1-201ENST00000622671 572 ntBASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 AF106564.1-201ENST00000607058 2553 ntBASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 OR7E47P-201ENST00000546390 1422 ntBASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC131281.2-201ENST00000520478 145 ntBASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF103-CHMP3A0A140T963 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 DUX4L19-201ENST00000557448 1267 ntBASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RNF103-CHMP3A0A140T963 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF103-CHMP3A0A140T963 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF103-CHMP3A0A140T963 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF103-CHMP3A0A140T963 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RNF103-CHMP3A0A140T963 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 AL138724.1-201ENST00000606771 1088 ntBASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
RNF103-CHMP3A0A140T963 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 FEM1AP4-201ENST00000443167 1987 ntBASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 AC010141.3-201ENST00000456659 717 ntBASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF103-CHMP3A0A140T963 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 AC136469.2-201ENST00000623944 1028 ntBASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RNF103-CHMP3A0A140T963 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms