Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 AP003097.1-201ENST00000530657 1135 ntBASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC061975.6-201ENST00000579045 1553 ntBASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
LOC102724428A0A0B4J2F2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.2■■□□□ 1.95
LOC102724428A0A0B4J2F2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.2■■□□□ 1.95
LOC102724428A0A0B4J2F2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 UNC93B4-201ENST00000505679 747 ntBASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
LOC102724428A0A0B4J2F2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC102724428A0A0B4J2F2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 LSM12P1-201ENST00000411836 588 ntBASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 AC087742.1-201ENST00000575880 1738 ntBASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
LOC102724428A0A0B4J2F2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
LOC102724428A0A0B4J2F2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 USP36-216ENST00000589424 970 ntTSL 5 BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 KRT17P1-201ENST00000399211 1546 ntBASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
LOC102724428A0A0B4J2F2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LOC102724428A0A0B4J2F2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
LOC102724428A0A0B4J2F2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC27.15■■□□□ 1.94
LOC102724428A0A0B4J2F2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.15■■□□□ 1.94
LOC102724428A0A0B4J2F2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC27.15■■□□□ 1.94
LOC102724428A0A0B4J2F2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
LOC102724428A0A0B4J2F2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LOC102724428A0A0B4J2F2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.94
LOC102724428A0A0B4J2F2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LOC102724428A0A0B4J2F2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC27.14■■□□□ 1.94
LOC102724428A0A0B4J2F2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.14■■□□□ 1.94
LOC102724428A0A0B4J2F2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.14■■□□□ 1.93
LOC102724428A0A0B4J2F2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 AC008550.1-201ENST00000511500 884 ntBASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 AC008403.3-201ENST00000598924 454 ntBASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
LOC102724428A0A0B4J2F2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 AL355472.2-201ENST00000422958 438 ntBASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms