Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV25A0A0B4J276 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV25A0A0B4J276 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV25A0A0B4J276 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 AC016769.1-201ENST00000409132 1010 ntBASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 AC137761.2-201ENST00000561729 223 ntBASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 AC145350.3-201ENST00000569033 163 ntBASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 AC133561.1-201ENST00000568600 2415 ntBASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV25A0A0B4J276 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 AC022517.1-201ENST00000592429 346 ntBASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV25A0A0B4J276 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 SLC7A5P1-201ENST00000568957 537 ntBASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.87■□□□□ 0.13
TRAV25A0A0B4J276 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 KRT18P61-201ENST00000585825 1298 ntBASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 AC010542.4-201ENST00000563151 1910 ntBASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 PKD1P6-201ENST00000343738 4769 ntBASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV25A0A0B4J276 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV25A0A0B4J276 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms